Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20]
59,737 sequences; 215,710,044 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq3628 217 2e-54
seq17943 214 3e-53
seq3532 210 3e-52
seq989 203 5e-50
seq54988 196 7e-48
seq17376 181 2e-43
>seq3628
Length=10935
Score = 217 bits (240), Expect = 2e-54
Identities = 187/226 (83%), Gaps = 4/226 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||| | ||| |||||| | |||||||| ||| |
Sbjct 7920 GTACAAAGGGCAGGGACGTAATCAACACATGCT-GATGACATATGTTTACTAGGTATT-C 7863
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||||||||| || ||||| ||||||
Sbjct 7862 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAGTTTCACAAGATT 7803
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | | || | ||||||||| | ||| || | ||||||||| |||||||||
Sbjct 7802 ACCCAATCTTTTCAGATAAGGTGATATAATCGCTGGCTTGGTCAGTGTAGTGCGCGTGCG 7743
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225
|||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct 7742 GCCCAGAACATC-GAGGGCATCACAGACCTGTTATTGCCTCCAACT 7698
Score = 194 bits (214), Expect = 3e-47
Identities = 180/228 (79%), Gaps = 14/228 (6%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||| |||| ||||| ||| |||||| | |||||||| ||| |
Sbjct 7618 GTACAAAGGGCAGGGTCGTAATCAACATATGCT-GATGACATATGTTTACTAGGTATT-C 7561
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|| |||||||| ||| |||||||| | |||||||||||||||| |||||
Sbjct 7560 CTTGTTGAAGAGCAATAATTGCAAGGCTCTATCCCCATCACGA------------GATTA 7513
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||| | | || | |||||| || ||||| || | ||||||||||||||||||||
Sbjct 7512 CCCAATCTTTTCAGATAAGGTGGTATACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGG 7453
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 7452 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 7405
>seq17943
Length=3454
Score = 214 bits (236), Expect = 3e-53
Identities = 187/229 (82%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||| |||||||||||||||| ||||| | ||| |||||| | |||||||| ||| |
Sbjct 2632 GTAGAAAGGGCAGGGACGTAATCAACACATGCT-GATGACATATGTTTACTAGGTATT-C 2689
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
|| |||||||| ||| |||||||||| |||||||||||||||| || ||||| ||||||
Sbjct 2690 CTTGTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAGTTTCACAAGATT 2749
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | | || | | ||||||| |||| | | ||||||||||||||||| |
Sbjct 2750 ACCCAATCTTTTCAGATATGGTGATATACTCTCCGGCTTGGTCAGTGTAGCGCGCGTGTG 2809
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 2810 GCCCAGAACATCTCAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 2858
>seq3532
Length=11102
Score = 210 bits (232), Expect = 3e-52
Identities = 164/193 (85%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 49 ACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAA 108
|||||| ||| |||||||||||| ||| |||||||||| |||||||||||||||| ||
Sbjct 266 ACTAGGTATT-CCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAG 208
Query 109 TTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGT 167
||||| |||||||||| | | || | ||||||||| ||||| || | |||||||
Sbjct 207 TTTCACAAGATTACCCAATCTTTTCAGATAAGGTGATATACTCGCTGGCTTGGTCAGTGT 148
Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 147 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTC 88
Query 228 CGTGGCCTAAAAG 240
| | |||||||
Sbjct 87 CATCAACTAAAAG 75
>seq989
Length=17883
Score = 203 bits (224), Expect = 5e-50
Identities = 185/228 (81%), Gaps = 4/228 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| ||||||||| || ||||| | || |||||| | |||||||| ||| |
Sbjct 3122 GTACAAATGGCAGGGACATAATCAACACATTCT-GATGACATATGTTTACTAGGTATT-C 3179
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| ||||||||||||||||||||||||| | || ||||| ||||||
Sbjct 3180 CTCGTTGAAGAGCAATAATTGCAATGATCTATCCCCATCACAACCAAGTTTCACAAGATT 3239
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | | || | |||| |||| ||||| || | |||||||||||| |||||
Sbjct 3240 ACCCAATCTTTTCCGATAAGG-GATATACTCGCTGGCTTGGTCAGTGTAGCGCTCGTGCA 3298
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227
|||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 3299 GCCCAGAACATCGAAGGGCATCACAGACCTGTTATTGCCTCCCACTTC 3346
>seq54988
Length=1073
Score = 196 bits (216), Expect = 7e-48
Identities = 165/199 (83%), Gaps = 3/199 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||| | ||| |||||| | |||||||| ||| |
Sbjct 352 GTACAAAGGGCAGGGACGTAATCAACACATGCT-GATGACATATGTTTACTAGGTATT-C 409
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||||||||| || ||| | ||||||
Sbjct 410 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAGTTTTACAAGATT 469
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
||||| | | || | ||||||||| ||||| || | |||||||||||||||||||
Sbjct 470 ACCCGATCTTTTCAGATAAGGTGATATACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCG 529
Query 180 GCCCAGAACATCTAAGGGC 198
|||||||||||||||||||
Sbjct 530 GCCCAGAACATCTAAGGGC 548
>seq17376
Length=3568
Score = 181 bits (200), Expect = 2e-43
Identities = 163/201 (81%), Gaps = 3/201 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||| | ||| |||||| | ||||| || ||| |
Sbjct 2135 GTACAAAGGGCAGGGACGTAATCAACACATGCT-GATGACATATGTTTACTGGGTATT-C 2078
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||| ||||||| ||| |||||||||| |||||||||||||||| || ||||| ||||||
Sbjct 2077 CTCTTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAGTTTCACAAGATT 2018
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | | || | ||||||||| |||| || | ||||||||||| |||||||
Sbjct 2017 ACCCAATCTTTTCAGATAAGGTGATATACTCACTGGCTTGGTCAGTGTAGCGTGCGTGCG 1958
Query 180 GCCCAGAACATCTAAGGGCAT 200
|||||||||||||||||||||
Sbjct 1957 GCCCAGAACATCTAAGGGCAT 1937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751564815955
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |