Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3628 217 2e-54 seq17943 214 3e-53 seq3532 210 3e-52 seq989 203 5e-50 seq54988 196 7e-48 seq17376 181 2e-43 >seq3628 Length=10935 Score = 217 bits (240), Expect = 2e-54 Identities = 187/226 (83%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||| | ||| |||||| | |||||||| ||| | Sbjct 7920 GTACAAAGGGCAGGGACGTAATCAACACATGCT-GATGACATATGTTTACTAGGTATT-C 7863 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||||||||| || ||||| |||||| Sbjct 7862 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAGTTTCACAAGATT 7803 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | || | ||||||||| | ||| || | ||||||||| ||||||||| Sbjct 7802 ACCCAATCTTTTCAGATAAGGTGATATAATCGCTGGCTTGGTCAGTGTAGTGCGCGTGCG 7743 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||||||||||| ||||||||||||||||||||||||||| |||| Sbjct 7742 GCCCAGAACATC-GAGGGCATCACAGACCTGTTATTGCCTCCAACT 7698 Score = 194 bits (214), Expect = 3e-47 Identities = 180/228 (79%), Gaps = 14/228 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||| |||| ||||| ||| |||||| | |||||||| ||| | Sbjct 7618 GTACAAAGGGCAGGGTCGTAATCAACATATGCT-GATGACATATGTTTACTAGGTATT-C 7561 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 || |||||||| ||| |||||||| | |||||||||||||||| ||||| Sbjct 7560 CTTGTTGAAGAGCAATAATTGCAAGGCTCTATCCCCATCACGA------------GATTA 7513 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | | || | |||||| || ||||| || | |||||||||||||||||||| Sbjct 7512 CCCAATCTTTTCAGATAAGGTGGTATACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGG 7453 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 7452 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 7405 >seq17943 Length=3454 Score = 214 bits (236), Expect = 3e-53 Identities = 187/229 (82%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||| |||||||||||||||| ||||| | ||| |||||| | |||||||| ||| | Sbjct 2632 GTAGAAAGGGCAGGGACGTAATCAACACATGCT-GATGACATATGTTTACTAGGTATT-C 2689 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 || |||||||| ||| |||||||||| |||||||||||||||| || ||||| |||||| Sbjct 2690 CTTGTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAGTTTCACAAGATT 2749 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | || | | ||||||| |||| | | ||||||||||||||||| | Sbjct 2750 ACCCAATCTTTTCAGATATGGTGATATACTCTCCGGCTTGGTCAGTGTAGCGCGCGTGTG 2809 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct 2810 GCCCAGAACATCTCAGGGCATCACAGACCTGTTATTGCCTCCAACTTCC 2858 >seq3532 Length=11102 Score = 210 bits (232), Expect = 3e-52 Identities = 164/193 (85%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 49 ACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAA 108 |||||| ||| |||||||||||| ||| |||||||||| |||||||||||||||| || Sbjct 266 ACTAGGTATT-CCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAG 208 Query 109 TTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGT 167 ||||| |||||||||| | | || | ||||||||| ||||| || | ||||||| Sbjct 207 TTTCACAAGATTACCCAATCTTTTCAGATAAGGTGATATACTCGCTGGCTTGGTCAGTGT 148 Query 168 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 147 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCCAACTTC 88 Query 228 CGTGGCCTAAAAG 240 | | ||||||| Sbjct 87 CATCAACTAAAAG 75 >seq989 Length=17883 Score = 203 bits (224), Expect = 5e-50 Identities = 185/228 (81%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| ||||||||| || ||||| | || |||||| | |||||||| ||| | Sbjct 3122 GTACAAATGGCAGGGACATAATCAACACATTCT-GATGACATATGTTTACTAGGTATT-C 3179 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| ||||||||||||||||||||||||| | || ||||| |||||| Sbjct 3180 CTCGTTGAAGAGCAATAATTGCAATGATCTATCCCCATCACAACCAAGTTTCACAAGATT 3239 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | || | |||| |||| ||||| || | |||||||||||| ||||| Sbjct 3240 ACCCAATCTTTTCCGATAAGG-GATATACTCGCTGGCTTGGTCAGTGTAGCGCTCGTGCA 3298 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 |||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 3299 GCCCAGAACATCGAAGGGCATCACAGACCTGTTATTGCCTCCCACTTC 3346 >seq54988 Length=1073 Score = 196 bits (216), Expect = 7e-48 Identities = 165/199 (83%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||| | ||| |||||| | |||||||| ||| | Sbjct 352 GTACAAAGGGCAGGGACGTAATCAACACATGCT-GATGACATATGTTTACTAGGTATT-C 409 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||||||||| || ||| | |||||| Sbjct 410 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAGTTTTACAAGATT 469 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| | | || | ||||||||| ||||| || | ||||||||||||||||||| Sbjct 470 ACCCGATCTTTTCAGATAAGGTGATATACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCG 529 Query 180 GCCCAGAACATCTAAGGGC 198 ||||||||||||||||||| Sbjct 530 GCCCAGAACATCTAAGGGC 548 >seq17376 Length=3568 Score = 181 bits (200), Expect = 2e-43 Identities = 163/201 (81%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||| | ||| |||||| | ||||| || ||| | Sbjct 2135 GTACAAAGGGCAGGGACGTAATCAACACATGCT-GATGACATATGTTTACTGGGTATT-C 2078 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||| ||||||| ||| |||||||||| |||||||||||||||| || ||||| |||||| Sbjct 2077 CTCTTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAGTTTCACAAGATT 2018 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | || | ||||||||| |||| || | ||||||||||| ||||||| Sbjct 2017 ACCCAATCTTTTCAGATAAGGTGATATACTCACTGGCTTGGTCAGTGTAGCGTGCGTGCG 1958 Query 180 GCCCAGAACATCTAAGGGCAT 200 ||||||||||||||||||||| Sbjct 1957 GCCCAGAACATCTAAGGGCAT 1937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751564815955