Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq3628 78.8 5e-13 seq15588 71.6 8e-11 >seq3628 Length=10935 Score = 78.8 bits (86), Expect = 5e-13 Identities = 72/90 (80%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 28 GGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTT 87 |||||| | | ||||| || | | | | | | |||||| ||||||| |||||||| ||| Sbjct 7076 GGTGCCAAACAAGTCATTATAA-ATCCTTGTCTGATCCCCAGTCGGCCTAGTTTACTGTT 7018 Query 88 AAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| ||||||||||||||| || || Sbjct 7017 AAGACTACAACGGTATCTGATCGTTTTTGA 6988 >seq15588 Length=3966 Score = 71.6 bits (78), Expect = 8e-11 Identities = 50/57 (88%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| ||| |||||||||||| ||||||||||| |||||||||||| || || || Sbjct 3833 GATCCCCAGTTGGCATAGTTTACTGTTAAGACTACAACGGTATCTGATTGTTTTTGA 3777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278244086430