Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq15588 295 1e-77 seq3628 289 5e-76 seq8713 268 2e-69 seq23453 241 2e-61 seq9898 241 2e-61 seq10590 221 2e-55 seq18020 127 4e-27 seq29326 113 8e-23 seq14748 111 3e-22 >seq15588 Length=3966 Score = 295 bits (326), Expect = 1e-77 Identities = 234/280 (84%), Gaps = 1/280 (0%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| ||||||||| |||| |||||||||||| |||||||||||||||||||| Sbjct 3497 ATGCACTTTACTGGGTGTTGGAGGGAACCAGGACTTTTATTTTGAAAAAATTAGAGTGTT 3556 Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||||||| | ||| ||||||||||||||||||||||| ||||||| ||| | |||| Sbjct 3557 CAAAGCAGGCTTATGCCTGAATACATTAGCATGGAATAATAAAATAGGATGTGTGATTCT 3616 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 ||||||||||||||||||| |||||||||| ||||||| ||| ||||| | |||| Sbjct 3617 ATTTTGTTGGTTTCTAGGATTACCGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTAT 3676 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278 | || ||||||||||||||||||||||| || ||||| ||||||||||||||| | Sbjct 3677 TACATCGTCAGAGGTGAAATTCTTGGATTGATGTAAGACAAACTACTGCGAAAGCATCTG 3736 Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||| |||||| |||| |||| || |||| ||| Sbjct 3737 CCAAGGATGACTTCATTGATCA-AGAACAAAGGTTAAGGG 3775 >seq3628 Length=10935 Score = 289 bits (320), Expect = 5e-76 Identities = 233/280 (83%), Gaps = 1/280 (0%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| ||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 6708 ATGCACTTTACTGGGTGTTGGAGGGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 6767 Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||||||| | ||| ||||||||||||||||||||||| ||||||| ||| | |||| Sbjct 6768 CAAAGCAGGCTTATGCCTGAATACATTAGCATGGAATAATAAAATAGGATGTGTGATTCT 6827 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 ||||||||||||||||||| ||| ||||| ||||||| ||| ||||| | |||| Sbjct 6828 ATTTTGTTGGTTTCTAGGATTACCGGGATGATAAATAGGGTCAGTTGGGGGAATTTGTAT 6887 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278 | || ||||||||||||||||||||||| || |||| ||||||||||||||| | Sbjct 6888 TTCATCGTCAGAGGTGAAATTCTTGGATTGATGTTAGACAAACTACTGCGAAAGCATCTG 6947 Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||||||||| |||||| |||| ||||||| |||| ||| Sbjct 6948 CCAAGGATGACTTCATTGATCA-AGAACGAAGGTTAAGGG 6986 >seq8713 Length=6249 Score = 268 bits (296), Expect = 2e-69 Identities = 213/256 (83%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| ||||||||| |||| ||||||||||| |||||||||||||||| |||| Sbjct 2036 ATGCACTTGACTGGGTGTTGGAGGGAACCAGGACTTTTGCTTTGAAAAAATTAGATTGTT 2095 Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||| ||| | ||| ||||| ||||||||||||||||| ||||||| ||| | |||| Sbjct 2096 CAAAGCTGGCTTATGCCTGAATAAATTAGCATGGAATAATAAAATAGGATGTGTGATTCT 2155 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 |||||||||||||||||||| | |||||||| ||||||| ||| ||||| | |||| Sbjct 2156 ATTTTGTTGGTTTCTAGGACTACTGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTAT 2215 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278 | |||||||||||||||||||||||||| || ||||| ||||||||| ||||| | Sbjct 2216 TACATTGTCAGAGGTGAAATTCTTGGATTGATGTAAGACAAACTACTGCAAAAGCATCTG 2275 Query 279 CCAAGGATGTTTTCAT 294 ||||||||| ||||| Sbjct 2276 CCAAGGATGACTTCAT 2291 >seq23453 Length=2616 Score = 241 bits (266), Expect = 2e-61 Identities = 193/233 (83%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| ||||||||| |||| |||||||||||||||||||||||||| |||||| Sbjct 146 ATGCACTTAACTGGGTGTTGGAGGGAACCAGGACTTTTACTTTGAAAAAATTAAAGTGTT 205 Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 ||||||| || | ||| ||||||| ||||||||||||||| ||||||| ||| | || | Sbjct 206 CAAAGCAAGCTTATGCCTGAATACACTAGCATGGAATAATAAAATAGGATGTGTGATTAT 265 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 ||||| ||||||||||||| |||||||||| ||||||| ||| ||||| | |||| Sbjct 266 ATTTTTTTGGTTTCTAGGATTACCGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTAT 325 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA 271 | || |||||||| |||||||||||||| || ||||| ||||||||| ||| Sbjct 326 TACATCGTCAGAGGAGAAATTCTTGGATTGATGTAAGACAAACTACTGCAAAA 378 >seq9898 Length=5855 Score = 241 bits (266), Expect = 2e-61 Identities = 193/233 (83%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| ||||||||| |||| |||||||||||| ||||||||||||| |||||| Sbjct 3541 ATGCACTTAACTGGGTGTTGGAGGGAACCAGGACTTTTAATTTGAAAAAATTAAAGTGTT 3600 Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 ||||||| || | ||| ||||||||||||||||||||||| ||||||| ||| | || | Sbjct 3601 CAAAGCAAGCTTATGCCTGAATACATTAGCATGGAATAATAAAATAGGATGTGTGATTAT 3660 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 ||||| ||||||||||||| |||||||||| ||||||| ||| ||||| | |||| Sbjct 3661 ATTTTTTTGGTTTCTAGGATTACCGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTAT 3720 Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA 271 | ||||| ||||| |||||||||||||| || ||||| ||||||||| ||| Sbjct 3721 TACATTGTGAGAGGAGAAATTCTTGGATTGATGTAAGACAAACTACTGCAAAA 3773 >seq10590 Length=5551 Score = 221 bits (244), Expect = 2e-55 Identities = 169/200 (85%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| ||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 200 ATGCACTTTACTGGGTGTTGGAGGGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 141 Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158 |||||||||| | ||| ||||||||||||||| ||||||| ||||||| ||| | |||| Sbjct 140 CAAAGCAGGCTTATGCCTGAATACATTAGCATGAAATAATAAAATAGGATGTGTGATTCT 81 Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218 ||||||||||||||||||| |||||||||| ||| ||| ||| ||||| | |||| Sbjct 80 ATTTTGTTGGTTTCTAGGATTACCGTAATGATAAATGGGGTCAGTTGGGGGCATTTGTAT 21 Query 219 TCAATTGTCAGAGGTGAAAT 238 | || |||||||||||||| Sbjct 20 TACATCGTCAGAGGTGAAAT 1 >seq18020 Length=3442 Score = 127 bits (140), Expect = 4e-27 Identities = 88/100 (88%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| ||||||||| || | ||||||||||||||||||||||||||||||||| Sbjct 100 ATGCACTTTACTGGGTGTTGGAGGTAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 41 Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAAT 138 |||||||||| | ||| |||||||||||||||||||||| Sbjct 40 CAAAGCAGGCTTATGCCTGAATACATTAGCATGGAATAAT 1 >seq29326 Length=2073 Score = 113 bits (124), Expect = 8e-23 Identities = 87/102 (85%), Gaps = 1/102 (1%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98 |||| ||| ||||||||| |||| |||||||||| |||||||||||||||||||||| Sbjct 490 ATGCACTTTACTGGGTGTTGGAGGGAACCAGGACTTTGACTTTGAAAAAATTAGAGTGTT 431 Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCA-TGGAATAATA 139 |||||||||| | ||| ||||||||||||| || || |||| Sbjct 430 CAAAGCAGGCTTATGCCTGAATACATTAGCATTGTAAAAATA 389 >seq14748 Length=4171 Score = 111 bits (122), Expect = 3e-22 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 123 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 182 || |||||| ||||||| ||||||| ||| | |||||||| |||||||||||||| || Sbjct 4056 ATAAGCATGTAATAATAAAATAGGATGTGTGATTCTATTTGGTTGGTTTCTAGGATTACC 4115 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238 |||||||| ||| ||| ||| ||||| | ||||| || |||||||||||||| Sbjct 4116 GTAATGATAAATGGGGTCAGTTGGGGGCATTTGTATTACATCGTCAGAGGTGAAAT 4171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914653286976