Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20]
59,737 sequences; 215,710,044 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq15588 295 1e-77
seq3628 289 5e-76
seq8713 268 2e-69
seq23453 241 2e-61
seq9898 241 2e-61
seq10590 221 2e-55
seq18020 127 4e-27
seq29326 113 8e-23
seq14748 111 3e-22
>seq15588
Length=3966
Score = 295 bits (326), Expect = 1e-77
Identities = 234/280 (84%), Gaps = 1/280 (0%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||| ||||||||| |||| |||||||||||| ||||||||||||||||||||
Sbjct 3497 ATGCACTTTACTGGGTGTTGGAGGGAACCAGGACTTTTATTTTGAAAAAATTAGAGTGTT 3556
Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158
|||||||||| | ||| ||||||||||||||||||||||| ||||||| ||| | ||||
Sbjct 3557 CAAAGCAGGCTTATGCCTGAATACATTAGCATGGAATAATAAAATAGGATGTGTGATTCT 3616
Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218
||||||||||||||||||| |||||||||| ||||||| ||| ||||| | ||||
Sbjct 3617 ATTTTGTTGGTTTCTAGGATTACCGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTAT 3676
Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278
| || ||||||||||||||||||||||| || ||||| ||||||||||||||| |
Sbjct 3677 TACATCGTCAGAGGTGAAATTCTTGGATTGATGTAAGACAAACTACTGCGAAAGCATCTG 3736
Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
||||||||| |||||| |||| |||| || |||| |||
Sbjct 3737 CCAAGGATGACTTCATTGATCA-AGAACAAAGGTTAAGGG 3775
>seq3628
Length=10935
Score = 289 bits (320), Expect = 5e-76
Identities = 233/280 (83%), Gaps = 1/280 (0%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 6708 ATGCACTTTACTGGGTGTTGGAGGGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 6767
Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158
|||||||||| | ||| ||||||||||||||||||||||| ||||||| ||| | ||||
Sbjct 6768 CAAAGCAGGCTTATGCCTGAATACATTAGCATGGAATAATAAAATAGGATGTGTGATTCT 6827
Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218
||||||||||||||||||| ||| ||||| ||||||| ||| ||||| | ||||
Sbjct 6828 ATTTTGTTGGTTTCTAGGATTACCGGGATGATAAATAGGGTCAGTTGGGGGAATTTGTAT 6887
Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278
| || ||||||||||||||||||||||| || |||| ||||||||||||||| |
Sbjct 6888 TTCATCGTCAGAGGTGAAATTCTTGGATTGATGTTAGACAAACTACTGCGAAAGCATCTG 6947
Query 279 CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
||||||||| |||||| |||| ||||||| |||| |||
Sbjct 6948 CCAAGGATGACTTCATTGATCA-AGAACGAAGGTTAAGGG 6986
>seq8713
Length=6249
Score = 268 bits (296), Expect = 2e-69
Identities = 213/256 (83%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||| ||||||||| |||| ||||||||||| |||||||||||||||| ||||
Sbjct 2036 ATGCACTTGACTGGGTGTTGGAGGGAACCAGGACTTTTGCTTTGAAAAAATTAGATTGTT 2095
Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158
|||||| ||| | ||| ||||| ||||||||||||||||| ||||||| ||| | ||||
Sbjct 2096 CAAAGCTGGCTTATGCCTGAATAAATTAGCATGGAATAATAAAATAGGATGTGTGATTCT 2155
Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218
|||||||||||||||||||| | |||||||| ||||||| ||| ||||| | ||||
Sbjct 2156 ATTTTGTTGGTTTCTAGGACTACTGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTAT 2215
Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCA 278
| |||||||||||||||||||||||||| || ||||| ||||||||| ||||| |
Sbjct 2216 TACATTGTCAGAGGTGAAATTCTTGGATTGATGTAAGACAAACTACTGCAAAAGCATCTG 2275
Query 279 CCAAGGATGTTTTCAT 294
||||||||| |||||
Sbjct 2276 CCAAGGATGACTTCAT 2291
>seq23453
Length=2616
Score = 241 bits (266), Expect = 2e-61
Identities = 193/233 (83%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||| ||||||||| |||| |||||||||||||||||||||||||| ||||||
Sbjct 146 ATGCACTTAACTGGGTGTTGGAGGGAACCAGGACTTTTACTTTGAAAAAATTAAAGTGTT 205
Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158
||||||| || | ||| ||||||| ||||||||||||||| ||||||| ||| | || |
Sbjct 206 CAAAGCAAGCTTATGCCTGAATACACTAGCATGGAATAATAAAATAGGATGTGTGATTAT 265
Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218
||||| ||||||||||||| |||||||||| ||||||| ||| ||||| | ||||
Sbjct 266 ATTTTTTTGGTTTCTAGGATTACCGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTAT 325
Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA 271
| || |||||||| |||||||||||||| || ||||| ||||||||| |||
Sbjct 326 TACATCGTCAGAGGAGAAATTCTTGGATTGATGTAAGACAAACTACTGCAAAA 378
>seq9898
Length=5855
Score = 241 bits (266), Expect = 2e-61
Identities = 193/233 (83%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||| ||||||||| |||| |||||||||||| ||||||||||||| ||||||
Sbjct 3541 ATGCACTTAACTGGGTGTTGGAGGGAACCAGGACTTTTAATTTGAAAAAATTAAAGTGTT 3600
Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158
||||||| || | ||| ||||||||||||||||||||||| ||||||| ||| | || |
Sbjct 3601 CAAAGCAAGCTTATGCCTGAATACATTAGCATGGAATAATAAAATAGGATGTGTGATTAT 3660
Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218
||||| ||||||||||||| |||||||||| ||||||| ||| ||||| | ||||
Sbjct 3661 ATTTTTTTGGTTTCTAGGATTACCGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTAT 3720
Query 219 TCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAA 271
| ||||| ||||| |||||||||||||| || ||||| ||||||||| |||
Sbjct 3721 TACATTGTGAGAGGAGAAATTCTTGGATTGATGTAAGACAAACTACTGCAAAA 3773
>seq10590
Length=5551
Score = 221 bits (244), Expect = 2e-55
Identities = 169/200 (85%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 200 ATGCACTTTACTGGGTGTTGGAGGGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 141
Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCT 158
|||||||||| | ||| ||||||||||||||| ||||||| ||||||| ||| | ||||
Sbjct 140 CAAAGCAGGCTTATGCCTGAATACATTAGCATGAAATAATAAAATAGGATGTGTGATTCT 81
Query 159 ATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTAT 218
||||||||||||||||||| |||||||||| ||| ||| ||| ||||| | ||||
Sbjct 80 ATTTTGTTGGTTTCTAGGATTACCGTAATGATAAATGGGGTCAGTTGGGGGCATTTGTAT 21
Query 219 TCAATTGTCAGAGGTGAAAT 238
| || ||||||||||||||
Sbjct 20 TACATCGTCAGAGGTGAAAT 1
>seq18020
Length=3442
Score = 127 bits (140), Expect = 4e-27
Identities = 88/100 (88%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||| ||||||||| || | |||||||||||||||||||||||||||||||||
Sbjct 100 ATGCACTTTACTGGGTGTTGGAGGTAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 41
Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATAAT 138
|||||||||| | ||| ||||||||||||||||||||||
Sbjct 40 CAAAGCAGGCTTATGCCTGAATACATTAGCATGGAATAAT 1
>seq29326
Length=2073
Score = 113 bits (124), Expect = 8e-23
Identities = 87/102 (85%), Gaps = 1/102 (1%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTT 98
|||| ||| ||||||||| |||| |||||||||| ||||||||||||||||||||||
Sbjct 490 ATGCACTTTACTGGGTGTTGGAGGGAACCAGGACTTTGACTTTGAAAAAATTAGAGTGTT 431
Query 99 CAAAGCAGGCCTTTGCTCGAATACATTAGCA-TGGAATAATA 139
|||||||||| | ||| ||||||||||||| || || ||||
Sbjct 430 CAAAGCAGGCTTATGCCTGAATACATTAGCATTGTAAAAATA 389
>seq14748
Length=4171
Score = 111 bits (122), Expect = 3e-22
Identities = 94/116 (81%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 123 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 182
|| |||||| ||||||| ||||||| ||| | |||||||| |||||||||||||| ||
Sbjct 4056 ATAAGCATGTAATAATAAAATAGGATGTGTGATTCTATTTGGTTGGTTTCTAGGATTACC 4115
Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238
|||||||| ||| ||| ||| ||||| | ||||| || ||||||||||||||
Sbjct 4116 GTAATGATAAATGGGGTCAGTTGGGGGCATTTGTATTACATCGTCAGAGGTGAAAT 4171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914653286976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |