Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq3628 188 3e-45 seq1650 104 1e-19 >seq3628 Length=10935 Score = 188 bits (208), Expect = 3e-45 Identities = 148/176 (84%), Gaps = 1/176 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||| |||||||||||||||||||||| || |||| |||||||| | ||||| ||||||| Sbjct 9666 GAGTTGAGTTGTTTGGGAATGCAGCTCAAAGTGGGTGGTAAATTCCATCTAAGGCTAAAT 9725 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 |||| ||||||||||||| ||||||| |||| ||||||||||||| ||||||||| Sbjct 9726 ATTGATGAGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGGAA 9785 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTG 215 |||||||| || || ||||||||||||| |||||||| | ||| | ||||||| Sbjct 9786 AGAGAGTT-AACAGTACGTGAAATTGTTAAAAGGGAAACAATTGAAGTTAGACTTG 9840 Score = 145 bits (160), Expect = 3e-32 Identities = 225/316 (71%), Gaps = 28/316 (9%) Strand=Plus/Plus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 |||||| ||| | ||| | | ||| | ||||||||| |||||||||||||||||||||| Sbjct 10032 AGGATGTTGGTGCAATAGCTTTAAATGACCCGTCTTGAAACACGGACCAAGGAGTCTAAC 10091 Query 440 ATCTATGCGAGTGTTTGGGTG--TCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGG 497 || ||||||| |||||||| | |||||| | || |||||||||| || | | ||| Sbjct 10092 ATGCCTGCGAGTATTTGGGTGTTTGAAACCCTTATGCATAATGAAAGTAAATGTAAATGG 10151 Query 498 GAACCCGTGAGGGTGCACCATCGACCGATCCTGAT--GTCTTCGGATGGATTTGAGTAAG 555 |||| | ||||||||| |||| ||| ||| | | ||||| |||||||| Sbjct 10152 GAACTTTTTTAAGTGCACCATTGACCAGTCCAGATTATTTATATGATGGTACTGAGTAAG 10211 Query 556 AGCATA-------GCT---GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 |||| | ||| ||| || | || | ||||| ||| || | || Sbjct 10212 AGCAAAAGAAACTGCTTAACTTGAGA--AGTAAAAGGGTGA--TAT-----AAAA--TTG 10260 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 | |||| || | ||||| ||||| |||||||||| ||||||||||||| ||||| Sbjct 10261 ACCTTAGAGCTAAGT---GTGGAAGCTCGTAGCGGTTCTGACGTGCAAATCGATTGTCAA 10317 Query 666 ATTTGGGTATAGGGGC 681 |||||||||||||||| Sbjct 10318 ATTTGGGTATAGGGGC 10333 >seq1650 Length=15145 Score = 104 bits (114), Expect = 1e-19 Identities = 98/124 (79%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 |||||| ||| | ||| | | ||| | ||||||||| |||||||||||||||||||||| Sbjct 3965 AGGATGTTGGTGCAATAGCTTTAAATGACCCGTCTTGAAACACGGACCAAGGAGTCTAAC 4024 Query 440 ATCTATGCGAGTGTTTGGGTG--TCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGG 497 || ||||||| |||||||| | |||||| | || |||||||||| || | | ||| Sbjct 4025 ATGCCTGCGAGTATTTGGGTGTTTGAAACCCTTATGCATAATGAAAGTAAATGTAAATGG 4084 Query 498 GAAC 501 |||| Sbjct 4085 GAAC 4088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078718641350