Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq3628 334 1e-89 seq989 307 2e-81 seq3532 197 2e-48 seq17943 118 2e-24 seq54988 82.4 1e-13 seq17376 77.0 5e-12 >seq3628 Length=10935 Score = 334 bits (370), Expect = 1e-89 Identities = 229/258 (89%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7487 TACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 7428 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||||||| || | | ||||||||||||||||| |||| Sbjct 7427 ACCTGTTATTGCCTCCAACTTCCATCAACTAAACGTTGATAGTCCCTCTAAGAAGTCAGC 7368 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| |||||| | || |||||||||||| ||||||||||||||||||||||||| Sbjct 7367 AGCCAGCCATAGCCAGCTGGACTATTTAGCAGGAGAAGGTCTCGTTCGTTATCGGAATTA 7308 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 ||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct 7307 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACAAAATCAAGA 7248 Query 241 AAGAGCTATCAATCTGTC 258 || ||||||||||||||| Sbjct 7247 AAAAGCTATCAATCTGTC 7230 Score = 105 bits (116), Expect = 1e-20 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 || ||| ||||| |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 7776 TAATCGCTGGCTTGGTCAGTGTAGTGCGCGTGCGGCCCAGAACATC-GAGGGCATCACAG 7718 Query 61 ACCTGTTATTGCCTCAAACT 80 ||||||||||||||| |||| Sbjct 7717 ACCTGTTATTGCCTCCAACT 7698 >seq989 Length=17883 Score = 307 bits (340), Expect = 2e-81 Identities = 223/258 (86%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||| ||||||||||||| ||||| |||||||||||| ||||||||||||| Sbjct 3265 TACTCGCTGGCTTGGTCAGTGTAGCGCTCGTGCAGCCCAGAACATCGAAGGGCATCACAG 3324 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||| || || | | ||||||||||||||||| |||| Sbjct 3325 ACCTGTTATTGCCTCCCACTTCAATCAACTAAACGTTGATAGTCCCTCTAAGAAGTCAGC 3384 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 ||| |||||| | || ||||||||| || ||||||||||||||||||||||||| Sbjct 3385 AGCCAGCCATAGCCAGCTGGACTATTTAGCCGGAGAAGGTCTCGTTCGTTATCGGAATTA 3444 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 ||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| Sbjct 3445 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACAAAATCAAGA 3504 Query 241 AAGAGCTATCAATCTGTC 258 || ||||||||||||||| Sbjct 3505 AAAAGCTATCAATCTGTC 3522 Score = 154 bits (170), Expect = 2e-35 Identities = 94/100 (94%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3580 GTCTCGTTTGTTATTGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 3639 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||| ||| | |||||||||| ||||||||||||||| Sbjct 3640 ACCACCAACCACAAAATCAAGAAAAAGCTATCAATCTGTC 3679 >seq3532 Length=11102 Score = 197 bits (218), Expect = 2e-48 Identities = 145/169 (86%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 169 TACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 110 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||| ||||||||| || ||| ||||||||||||||||| |||| Sbjct 109 ACCTGTTATTGCCTCCAACTTCCATCAACTAAAAGTTGATAGTCCCTCTAAGAAGTCAGC 50 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGT 169 ||| |||||| | || |||||||||||| |||||||||||||| Sbjct 49 AGCCAGCCATAGCCAGCTGGACTATTTAGCAGGAGAAGGTCTCGTTCGT 1 >seq17943 Length=3454 Score = 118 bits (130), Expect = 2e-24 Identities = 77/85 (91%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 ||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 2776 TACTCTCCGGCTTGGTCAGTGTAGCGCGCGTGTGGCCCAGAACATCTCAGGGCATCACAG 2835 Query 61 ACCTGTTATTGCCTCAAACTTCCAT 85 ||||||||||||||| ||||||||| Sbjct 2836 ACCTGTTATTGCCTCCAACTTCCAT 2860 >seq54988 Length=1073 Score = 82.4 bits (90), Expect = 1e-13 Identities = 50/53 (94%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGC 53 |||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 496 TACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGC 548 >seq17376 Length=3568 Score = 77.0 bits (84), Expect = 5e-12 Identities = 50/55 (91%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCAT 55 ||||| ||||| |||||||||||| |||||||||||||||||||||||||||| Sbjct 1991 TACTCACTGGCTTGGTCAGTGTAGCGTGCGTGCGGCCCAGAACATCTAAGGGCAT 1937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796338890097