Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20]
59,737 sequences; 215,710,044 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq3628 334 1e-89
seq989 307 2e-81
seq3532 197 2e-48
seq17943 118 2e-24
seq54988 82.4 1e-13
seq17376 77.0 5e-12
>seq3628
Length=10935
Score = 334 bits (370), Expect = 1e-89
Identities = 229/258 (89%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7487 TACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 7428
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||| ||||||||| || | | ||||||||||||||||| ||||
Sbjct 7427 ACCTGTTATTGCCTCCAACTTCCATCAACTAAACGTTGATAGTCCCTCTAAGAAGTCAGC 7368
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
||| |||||| | || |||||||||||| |||||||||||||||||||||||||
Sbjct 7367 AGCCAGCCATAGCCAGCTGGACTATTTAGCAGGAGAAGGTCTCGTTCGTTATCGGAATTA 7308
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct 7307 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACAAAATCAAGA 7248
Query 241 AAGAGCTATCAATCTGTC 258
|| |||||||||||||||
Sbjct 7247 AAAAGCTATCAATCTGTC 7230
Score = 105 bits (116), Expect = 1e-20
Identities = 72/80 (90%), Gaps = 1/80 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|| ||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 7776 TAATCGCTGGCTTGGTCAGTGTAGTGCGCGTGCGGCCCAGAACATC-GAGGGCATCACAG 7718
Query 61 ACCTGTTATTGCCTCAAACT 80
||||||||||||||| ||||
Sbjct 7717 ACCTGTTATTGCCTCCAACT 7698
>seq989
Length=17883
Score = 307 bits (340), Expect = 2e-81
Identities = 223/258 (86%), Gaps = 0/258 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| ||||| ||||||||||||| ||||| |||||||||||| |||||||||||||
Sbjct 3265 TACTCGCTGGCTTGGTCAGTGTAGCGCTCGTGCAGCCCAGAACATCGAAGGGCATCACAG 3324
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||| ||||| || || | | ||||||||||||||||| ||||
Sbjct 3325 ACCTGTTATTGCCTCCCACTTCAATCAACTAAACGTTGATAGTCCCTCTAAGAAGTCAGC 3384
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
||| |||||| | || ||||||||| || |||||||||||||||||||||||||
Sbjct 3385 AGCCAGCCATAGCCAGCTGGACTATTTAGCCGGAGAAGGTCTCGTTCGTTATCGGAATTA 3444
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct 3445 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACAAAATCAAGA 3504
Query 241 AAGAGCTATCAATCTGTC 258
|| |||||||||||||||
Sbjct 3505 AAAAGCTATCAATCTGTC 3522
Score = 154 bits (170), Expect = 2e-35
Identities = 94/100 (94%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3580 GTCTCGTTTGTTATTGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 3639
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||| ||| | |||||||||| |||||||||||||||
Sbjct 3640 ACCACCAACCACAAAATCAAGAAAAAGCTATCAATCTGTC 3679
>seq3532
Length=11102
Score = 197 bits (218), Expect = 2e-48
Identities = 145/169 (86%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 169 TACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 110
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||| ||||||||| || ||| ||||||||||||||||| ||||
Sbjct 109 ACCTGTTATTGCCTCCAACTTCCATCAACTAAAAGTTGATAGTCCCTCTAAGAAGTCAGC 50
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGT 169
||| |||||| | || |||||||||||| ||||||||||||||
Sbjct 49 AGCCAGCCATAGCCAGCTGGACTATTTAGCAGGAGAAGGTCTCGTTCGT 1
>seq17943
Length=3454
Score = 118 bits (130), Expect = 2e-24
Identities = 77/85 (91%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
||||| |||| |||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 2776 TACTCTCCGGCTTGGTCAGTGTAGCGCGCGTGTGGCCCAGAACATCTCAGGGCATCACAG 2835
Query 61 ACCTGTTATTGCCTCAAACTTCCAT 85
||||||||||||||| |||||||||
Sbjct 2836 ACCTGTTATTGCCTCCAACTTCCAT 2860
>seq54988
Length=1073
Score = 82.4 bits (90), Expect = 1e-13
Identities = 50/53 (94%), Gaps = 0/53 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGC 53
|||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 496 TACTCGCTGGCTTGGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGC 548
>seq17376
Length=3568
Score = 77.0 bits (84), Expect = 5e-12
Identities = 50/55 (91%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCAT 55
||||| ||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 1991 TACTCACTGGCTTGGTCAGTGTAGCGTGCGTGCGGCCCAGAACATCTAAGGGCAT 1937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796338890097
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |