Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq54988 82.4 5e-14 seq3628 82.4 5e-14 seq3532 82.4 5e-14 >seq54988 Length=1073 Score = 82.4 bits (90), Expect = 5e-14 Identities = 73/86 (85%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||| |||| || ||| ||||||||| ||||||||||| |||||||||| Sbjct 303 TCCGAAC-TCCTCAAAAAGC-ATGTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 359 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| || ||| Sbjct 360 GGCAGGGACGTAAT-CAACACATGCT 384 >seq3628 Length=10935 Score = 82.4 bits (90), Expect = 5e-14 Identities = 73/86 (85%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||| |||| || ||| ||||||||| ||||||||||| |||||||||| Sbjct 7969 TCCGAAC-TCCTCAAAAAGC-ATGTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 7913 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| || ||| Sbjct 7912 GGCAGGGACGTAAT-CAACACATGCT 7888 >seq3532 Length=11102 Score = 82.4 bits (90), Expect = 5e-14 Identities = 73/86 (85%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 ||||||| | |||| |||| || ||| ||||||||| ||||||||||| ||||||||| Sbjct 3922 TCCGAAA-TCCTCAAAAAGC-ATGTCAATCGGTAGTA-GCGACGGGCGGTTTGTACAAAG 3978 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| || ||| Sbjct 3979 GGCAGGGACGTAAT-CAACACATGCT 4003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300631541660