Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20]
59,737 sequences; 215,710,044 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq15588 172 7e-41
seq10590 172 7e-41
seq3628 172 7e-41
seq8713 159 4e-37
seq23453 143 3e-32
seq9898 143 3e-32
seq18020 136 5e-30
seq29326 114 2e-23
>seq15588
Length=3966
Score = 172 bits (190), Expect = 7e-41
Identities = 157/194 (81%), Gaps = 3/194 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||| ||||||| |||||||||||||||||||||||
Sbjct 3633 CTAGAAACCAACAAAATAGAATCACACATCCTATTTTATTATTCCATGCTAATGTATTCA 3574
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
||| ||||||||||||||||||||||||||| |||| |||||||||||||||| | |
Sbjct 3573 GGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAAATAAAAGTCCTGGTTCCCTCCAA 3514
Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCT-GGGTAATGCAGTACTCGC 182
|| ||| | ||| |||| | | ||||||||||||| | || || |||||| | |
Sbjct 3513 CACCCAGTAAAGTGCATTAGAGTTCACCAAGAGGTAAGCCTCCAAAAAATCAGTACACAC 3454
Query 183 CGTGAGGCGGACCA 196
| ||||||||||
Sbjct 3453 CAAAAGGCGGACCA 3440
>seq10590
Length=5551
Score = 172 bits (190), Expect = 7e-41
Identities = 157/194 (81%), Gaps = 3/194 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||| ||||||| ||||||| |||||||||||||||
Sbjct 64 CTAGAAACCAACAAAATAGAATCACACATCCTATTTTATTATTTCATGCTAATGTATTCA 123
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| | |
Sbjct 124 GGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCTCCAA 183
Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCT-GGGTAATGCAGTACTCGC 182
|| ||| | ||| |||| | | ||||||||||||| | || || |||||| | |
Sbjct 184 CACCCAGTAAAGTGCATTAGAGTTCACCAAGAGGTAAGCCTCCAACAAATCAGTACACAC 243
Query 183 CGTGAGGCGGACCA 196
| ||||||||||
Sbjct 244 CAAAAGGCGGACCA 257
>seq3628
Length=10935
Score = 172 bits (190), Expect = 7e-41
Identities = 158/195 (81%), Gaps = 5/195 (3%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||| ||||||| |||||||||||||||||||||||
Sbjct 6844 CTAGAAACCAACAAAATAGAATCACACATCCTATTTTATTATTCCATGCTAATGTATTCA 6785
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| | |
Sbjct 6784 GGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCTCCAA 6725
Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCT--GGGTAATGCAGTACTCG 181
|| ||| | ||| |||| | | |||| |||||||| | || ||| |||||| |
Sbjct 6724 CACCCAGTAAAGTGCATTAGAGTTCACAAAGAGGTAAGCCTCCAACGAAT-CAGTACACA 6666
Query 182 CCGTGAGGCGGACCA 196
|| ||||||||||
Sbjct 6665 CCAAAAGGCGGACCA 6651
>seq8713
Length=6249
Score = 159 bits (176), Expect = 4e-37
Identities = 154/194 (79%), Gaps = 3/194 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||| ||||||| ||||||||||||||||| |||||
Sbjct 2172 CTAGAAACCAACAAAATAGAATCACACATCCTATTTTATTATTCCATGCTAATTTATTCA 2113
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
||| |||||| |||||||||| ||||||||| |||| | ||||||||||||||| | |
Sbjct 2112 GGCATAAGCCAGCTTTGAACAATCTAATTTTTTCAAAGCAAAAGTCCTGGTTCCCTCCAA 2053
Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCT-GGGTAATGCAGTACTCGC 182
|| ||| | ||| |||| | | ||||||||||||| | || || |||||| | |
Sbjct 2052 CACCCAGTCAAGTGCATTAGAGTTCACCAAGAGGTAAGCCTCCAACAAATCAGTACACAC 1993
Query 183 CGTGAGGCGGACCA 196
| ||||||||||
Sbjct 1992 CAAAAGGCGGACCA 1979
>seq23453
Length=2616
Score = 143 bits (158), Expect = 3e-32
Identities = 125/153 (82%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||| |||||| | ||| ||||||| ||||||||||||||| |||||||
Sbjct 282 CTAGAAACCAAAAAAATATAATCACACATCCTATTTTATTATTCCATGCTAGTGTATTCA 223
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
||| ||||| ||||||||||||| ||||||| |||| ||||||||||||||||| | |
Sbjct 222 GGCATAAGCTTGCTTTGAACACTTTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCTCCAA 163
Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAG 156
|| ||| | ||| |||| | ||||||||||
Sbjct 162 CACCCAGTTAAGTGCATTATAGTTCACCAAGAG 130
>seq9898
Length=5855
Score = 143 bits (158), Expect = 3e-32
Identities = 125/153 (82%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||| |||||| | ||| ||||||| |||||||||||||||||||||||
Sbjct 3677 CTAGAAACCAAAAAAATATAATCACACATCCTATTTTATTATTCCATGCTAATGTATTCA 3618
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
||| ||||| ||||||||||||| ||||||| |||| |||||||||||||||| | |
Sbjct 3617 GGCATAAGCTTGCTTTGAACACTTTAATTTTTTCAAATTAAAAGTCCTGGTTCCCTCCAA 3558
Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAG 156
|| ||| | ||| |||| | ||||||||||
Sbjct 3557 CACCCAGTTAAGTGCATTATAGTTCACCAAGAG 3525
>seq18020
Length=3442
Score = 136 bits (150), Expect = 5e-30
Identities = 129/158 (82%), Gaps = 5/158 (3%)
Strand=Plus/Plus
Query 43 ATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAG 102
|||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||
Sbjct 1 ATTATTCCATGCTAATGTATTCAGGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAA 60
Query 103 GTAAAAGTCCTGGTT-CCTCC-GCACACCAATGAAG-GCATACGGGCTCACCAAGAGGTA 159
||||||||||||||| ||||| ||| ||| | ||| |||| | | |||||||||||||
Sbjct 61 GTAAAAGTCCTGGTTACCTCCAACAC-CCAGTAAAGTGCATTAGAGTTCACCAAGAGGTA 119
Query 160 GGGCT-GGGTAATGCAGTACTCGCCGTGAGGCGGACCA 196
| || || |||||| | || ||||||||||
Sbjct 120 AGCCTCCAACAAATCAGTACACACCAAAAGGCGGACCA 157
>seq29326
Length=2073
Score = 114 bits (126), Expect = 2e-23
Identities = 124/159 (78%), Gaps = 4/159 (3%)
Strand=Plus/Plus
Query 42 TATTATTCCA-TGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCA 100
|||| || || ||||||||||||| ||| ||||||||||||||||||||||||||| |||
Sbjct 389 TATTTTTACAATGCTAATGTATTCAGGCATAAGCCTGCTTTGAACACTCTAATTTTTTCA 448
Query 101 AGGTAAAAGTCCTGGTTCCTCCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGT 158
| || |||||||||||||| | ||| ||| | ||| |||| | | ||| ||||||||
Sbjct 449 AAGTCAAAGTCCTGGTTCCCTCCAACACCCAGTAAAGTGCATTGGAGTTCATCAAGAGGT 508
Query 159 AGGGCT-GGGTAATGCAGTACTCGCCGTGAGGCGGACCA 196
| | || || |||||| | || ||||||||||
Sbjct 509 AAGCCTCCAACAAATCAGTACACACCAAAAGGCGGACCA 547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594855556458
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |