Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq15588 172 7e-41 seq10590 172 7e-41 seq3628 172 7e-41 seq8713 159 4e-37 seq23453 143 3e-32 seq9898 143 3e-32 seq18020 136 5e-30 seq29326 114 2e-23 >seq15588 Length=3966 Score = 172 bits (190), Expect = 7e-41 Identities = 157/194 (81%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||| Sbjct 3633 CTAGAAACCAACAAAATAGAATCACACATCCTATTTTATTATTCCATGCTAATGTATTCA 3574 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 ||| ||||||||||||||||||||||||||| |||| |||||||||||||||| | | Sbjct 3573 GGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAAATAAAAGTCCTGGTTCCCTCCAA 3514 Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCT-GGGTAATGCAGTACTCGC 182 || ||| | ||| |||| | | ||||||||||||| | || || |||||| | | Sbjct 3513 CACCCAGTAAAGTGCATTAGAGTTCACCAAGAGGTAAGCCTCCAAAAAATCAGTACACAC 3454 Query 183 CGTGAGGCGGACCA 196 | |||||||||| Sbjct 3453 CAAAAGGCGGACCA 3440 >seq10590 Length=5551 Score = 172 bits (190), Expect = 7e-41 Identities = 157/194 (81%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||| ||||||| ||||||| ||||||||||||||| Sbjct 64 CTAGAAACCAACAAAATAGAATCACACATCCTATTTTATTATTTCATGCTAATGTATTCA 123 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 ||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| | | Sbjct 124 GGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCTCCAA 183 Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCT-GGGTAATGCAGTACTCGC 182 || ||| | ||| |||| | | ||||||||||||| | || || |||||| | | Sbjct 184 CACCCAGTAAAGTGCATTAGAGTTCACCAAGAGGTAAGCCTCCAACAAATCAGTACACAC 243 Query 183 CGTGAGGCGGACCA 196 | |||||||||| Sbjct 244 CAAAAGGCGGACCA 257 >seq3628 Length=10935 Score = 172 bits (190), Expect = 7e-41 Identities = 158/195 (81%), Gaps = 5/195 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||| Sbjct 6844 CTAGAAACCAACAAAATAGAATCACACATCCTATTTTATTATTCCATGCTAATGTATTCA 6785 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 ||| ||||||||||||||||||||||||||| |||| ||||||||||||||||| | | Sbjct 6784 GGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCTCCAA 6725 Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCT--GGGTAATGCAGTACTCG 181 || ||| | ||| |||| | | |||| |||||||| | || ||| |||||| | Sbjct 6724 CACCCAGTAAAGTGCATTAGAGTTCACAAAGAGGTAAGCCTCCAACGAAT-CAGTACACA 6666 Query 182 CCGTGAGGCGGACCA 196 || |||||||||| Sbjct 6665 CCAAAAGGCGGACCA 6651 >seq8713 Length=6249 Score = 159 bits (176), Expect = 4e-37 Identities = 154/194 (79%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||| ||||||| ||||||||||||||||| ||||| Sbjct 2172 CTAGAAACCAACAAAATAGAATCACACATCCTATTTTATTATTCCATGCTAATTTATTCA 2113 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 ||| |||||| |||||||||| ||||||||| |||| | ||||||||||||||| | | Sbjct 2112 GGCATAAGCCAGCTTTGAACAATCTAATTTTTTCAAAGCAAAAGTCCTGGTTCCCTCCAA 2053 Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCT-GGGTAATGCAGTACTCGC 182 || ||| | ||| |||| | | ||||||||||||| | || || |||||| | | Sbjct 2052 CACCCAGTCAAGTGCATTAGAGTTCACCAAGAGGTAAGCCTCCAACAAATCAGTACACAC 1993 Query 183 CGTGAGGCGGACCA 196 | |||||||||| Sbjct 1992 CAAAAGGCGGACCA 1979 >seq23453 Length=2616 Score = 143 bits (158), Expect = 3e-32 Identities = 125/153 (82%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||| |||||| | ||| ||||||| ||||||||||||||| ||||||| Sbjct 282 CTAGAAACCAAAAAAATATAATCACACATCCTATTTTATTATTCCATGCTAGTGTATTCA 223 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 ||| ||||| ||||||||||||| ||||||| |||| ||||||||||||||||| | | Sbjct 222 GGCATAAGCTTGCTTTGAACACTTTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCTCCAA 163 Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAG 156 || ||| | ||| |||| | |||||||||| Sbjct 162 CACCCAGTTAAGTGCATTATAGTTCACCAAGAG 130 >seq9898 Length=5855 Score = 143 bits (158), Expect = 3e-32 Identities = 125/153 (82%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||| |||||| | ||| ||||||| ||||||||||||||||||||||| Sbjct 3677 CTAGAAACCAAAAAAATATAATCACACATCCTATTTTATTATTCCATGCTAATGTATTCA 3618 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 ||| ||||| ||||||||||||| ||||||| |||| |||||||||||||||| | | Sbjct 3617 GGCATAAGCTTGCTTTGAACACTTTAATTTTTTCAAATTAAAAGTCCTGGTTCCCTCCAA 3558 Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAG 156 || ||| | ||| |||| | |||||||||| Sbjct 3557 CACCCAGTTAAGTGCATTATAGTTCACCAAGAG 3525 >seq18020 Length=3442 Score = 136 bits (150), Expect = 5e-30 Identities = 129/158 (82%), Gaps = 5/158 (3%) Strand=Plus/Plus Query 43 ATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAG 102 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||| Sbjct 1 ATTATTCCATGCTAATGTATTCAGGCATAAGCCTGCTTTGAACACTCTAATTTTTTCAAA 60 Query 103 GTAAAAGTCCTGGTT-CCTCC-GCACACCAATGAAG-GCATACGGGCTCACCAAGAGGTA 159 ||||||||||||||| ||||| ||| ||| | ||| |||| | | ||||||||||||| Sbjct 61 GTAAAAGTCCTGGTTACCTCCAACAC-CCAGTAAAGTGCATTAGAGTTCACCAAGAGGTA 119 Query 160 GGGCT-GGGTAATGCAGTACTCGCCGTGAGGCGGACCA 196 | || || |||||| | || |||||||||| Sbjct 120 AGCCTCCAACAAATCAGTACACACCAAAAGGCGGACCA 157 >seq29326 Length=2073 Score = 114 bits (126), Expect = 2e-23 Identities = 124/159 (78%), Gaps = 4/159 (3%) Strand=Plus/Plus Query 42 TATTATTCCA-TGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCA 100 |||| || || ||||||||||||| ||| ||||||||||||||||||||||||||| ||| Sbjct 389 TATTTTTACAATGCTAATGTATTCAGGCATAAGCCTGCTTTGAACACTCTAATTTTTTCA 448 Query 101 AGGTAAAAGTCCTGGTTCCTCCGCACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGT 158 | || |||||||||||||| | ||| ||| | ||| |||| | | ||| |||||||| Sbjct 449 AAGTCAAAGTCCTGGTTCCCTCCAACACCCAGTAAAGTGCATTGGAGTTCATCAAGAGGT 508 Query 159 AGGGCT-GGGTAATGCAGTACTCGCCGTGAGGCGGACCA 196 | | || || |||||| | || |||||||||| Sbjct 509 AAGCCTCCAACAAATCAGTACACACCAAAAGGCGGACCA 547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594855556458