Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20]
59,737 sequences; 215,710,044 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq15588 208 8e-52
seq3628 205 9e-51
seq8713 199 4e-49
seq23453 187 3e-45
seq10590 187 3e-45
seq9898 187 3e-45
seq18020 109 6e-22
seq29326 95.1 1e-17
seq14748 91.5 2e-16
>seq15588
Length=3966
Score = 208 bits (230), Expect = 8e-52
Identities = 161/190 (85%), Gaps = 1/190 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||||||||||||||| |||||||||||||||| ||||||||||||| | ||| |||||
Sbjct 3520 GGAACCAGGACTTTTATTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATA 3579
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||| ||| | ||||||||||| |||||||||||
Sbjct 3580 CATTAGCATGGAATAATAAAATAGGATGTGTGATTCTATTTTGTTGGTTTCTAGGA-TTA 3638
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||||||||| || ||| ||||| | ||||| || |||| |||||||||||
Sbjct 3639 CCGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTATTACATCGTCAGAGGTGAAATTC 3698
Query 181 TTGGATTTAT 190
||||||| ||
Sbjct 3699 TTGGATTGAT 3708
>seq3628
Length=10935
Score = 205 bits (226), Expect = 9e-51
Identities = 160/190 (84%), Gaps = 1/190 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||
Sbjct 6731 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATA 6790
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||| ||| | ||||||||||| |||||||||||
Sbjct 6791 CATTAGCATGGAATAATAAAATAGGATGTGTGATTCTATTTTGTTGGTTTCTAGGA-TTA 6849
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||| |||||||||| || ||| ||||| | ||||| || |||| |||||||||||
Sbjct 6850 CCGGGATGATAAATAGGGTCAGTTGGGGGAATTTGTATTTCATCGTCAGAGGTGAAATTC 6909
Query 181 TTGGATTTAT 190
||||||| ||
Sbjct 6910 TTGGATTGAT 6919
>seq8713
Length=6249
Score = 199 bits (220), Expect = 4e-49
Identities = 159/190 (84%), Gaps = 1/190 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||| |||||||||||||||| ||||||||| ||| | ||| |||||
Sbjct 2059 GGAACCAGGACTTTTGCTTTGAAAAAATTAGATTGTTCAAAGCTGGCTTATGCCTGAATA 2118
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| |||||||||||| ||||||| ||| | ||||||||||| ||||||||||| |
Sbjct 2119 AATTAGCATGGAATAATAAAATAGGATGTGTGATTCTATTTTGTTGGTTTCTAGGA-CTA 2177
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
| ||||||||||||| || ||| ||||| | ||||| ||||||| |||||||||||
Sbjct 2178 CTGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTATTACATTGTCAGAGGTGAAATTC 2237
Query 181 TTGGATTTAT 190
||||||| ||
Sbjct 2238 TTGGATTGAT 2247
>seq23453
Length=2616
Score = 187 bits (206), Expect = 3e-45
Identities = 156/190 (82%), Gaps = 1/190 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||||||||||||||||||||||||||||| || |||||||||| || | ||| |||||
Sbjct 169 GGAACCAGGACTTTTACTTTGAAAAAATTAAAGTGTTCAAAGCAAGCTTATGCCTGAATA 228
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|| || |||||||||||| ||||||| ||| | || |||||| | |||||||||||
Sbjct 229 CACTAGCATGGAATAATAAAATAGGATGTGTGATTATATTTTTTTGGTTTCTAGGA-TTA 287
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||||||||| || ||| ||||| | ||||| || |||| ||| |||||||
Sbjct 288 CCGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTATTACATCGTCAGAGGAGAAATTC 347
Query 181 TTGGATTTAT 190
||||||| ||
Sbjct 348 TTGGATTGAT 357
>seq10590
Length=5551
Score = 187 bits (206), Expect = 3e-45
Identities = 149/178 (84%), Gaps = 1/178 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||
Sbjct 177 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATA 118
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||| ||||||| ||||||| ||| | ||||||||||| |||||||||||
Sbjct 117 CATTAGCATGAAATAATAAAATAGGATGTGTGATTCTATTTTGTTGGTTTCTAGGA-TTA 59
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAAT 178
|||||||||||||| || ||| ||||| | ||||| || |||| |||||||||
Sbjct 58 CCGTAATGATAAATGGGGTCAGTTGGGGGCATTTGTATTACATCGTCAGAGGTGAAAT 1
>seq9898
Length=5855
Score = 187 bits (206), Expect = 3e-45
Identities = 156/190 (82%), Gaps = 1/190 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||||||||||||||| ||||||||||||| || |||||||||| || | ||| |||||
Sbjct 3564 GGAACCAGGACTTTTAATTTGAAAAAATTAAAGTGTTCAAAGCAAGCTTATGCCTGAATA 3623
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| ||||||| ||| | || |||||| | |||||||||||
Sbjct 3624 CATTAGCATGGAATAATAAAATAGGATGTGTGATTATATTTTTTTGGTTTCTAGGA-TTA 3682
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||||||||| || ||| ||||| | ||||| ||||| | ||| |||||||
Sbjct 3683 CCGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTATTACATTGTGAGAGGAGAAATTC 3742
Query 181 TTGGATTTAT 190
||||||| ||
Sbjct 3743 TTGGATTGAT 3752
>seq18020
Length=3442
Score = 109 bits (120), Expect = 6e-22
Identities = 69/75 (92%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62
||||||||||||||||||||||||||||||| ||||||||||||| | ||| |||||||
Sbjct 75 AACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATACA 16
Query 63 TTACCATGGAATAAT 77
||| |||||||||||
Sbjct 15 TTAGCATGGAATAAT 1
>seq29326
Length=2073
Score = 95.1 bits (104), Expect = 1e-17
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
|||||||||||||| |||||||||||||||||| ||||||||||||| | ||| |||||
Sbjct 467 GGAACCAGGACTTTGACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATA 408
Query 61 CATTACCA-TGGAATAATA 78
||||| || || || ||||
Sbjct 407 CATTAGCATTGTAAAAATA 389
>seq14748
Length=4171
Score = 91.5 bits (100), Expect = 2e-16
Identities = 88/112 (79%), Gaps = 1/112 (1%)
Strand=Plus/Plus
Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126
|||| ||||||| ||||||| ||| | |||||||| || ||||||||||| ||||||
Sbjct 4061 CATGTAATAATAAAATAGGATGTGTGATTCTATTTGGTTGGTTTCTAGGA-TTACCGTAA 4119
Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAAT 178
|||||||| || ||| ||||| | ||||| || |||| |||||||||
Sbjct 4120 TGATAAATGGGGTCAGTTGGGGGCATTTGTATTACATCGTCAGAGGTGAAAT 4171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511703704480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |