Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq15588 208 8e-52 seq3628 205 9e-51 seq8713 199 4e-49 seq23453 187 3e-45 seq10590 187 3e-45 seq9898 187 3e-45 seq18020 109 6e-22 seq29326 95.1 1e-17 seq14748 91.5 2e-16 >seq15588 Length=3966 Score = 208 bits (230), Expect = 8e-52 Identities = 161/190 (85%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||||||||| |||||||||||||||| ||||||||||||| | ||| ||||| Sbjct 3520 GGAACCAGGACTTTTATTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATA 3579 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||| ||| | ||||||||||| ||||||||||| Sbjct 3580 CATTAGCATGGAATAATAAAATAGGATGTGTGATTCTATTTTGTTGGTTTCTAGGA-TTA 3638 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||||||||| || ||| ||||| | ||||| || |||| ||||||||||| Sbjct 3639 CCGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTATTACATCGTCAGAGGTGAAATTC 3698 Query 181 TTGGATTTAT 190 ||||||| || Sbjct 3699 TTGGATTGAT 3708 >seq3628 Length=10935 Score = 205 bits (226), Expect = 9e-51 Identities = 160/190 (84%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||| Sbjct 6731 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATA 6790 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||| ||| | ||||||||||| ||||||||||| Sbjct 6791 CATTAGCATGGAATAATAAAATAGGATGTGTGATTCTATTTTGTTGGTTTCTAGGA-TTA 6849 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||| |||||||||| || ||| ||||| | ||||| || |||| ||||||||||| Sbjct 6850 CCGGGATGATAAATAGGGTCAGTTGGGGGAATTTGTATTTCATCGTCAGAGGTGAAATTC 6909 Query 181 TTGGATTTAT 190 ||||||| || Sbjct 6910 TTGGATTGAT 6919 >seq8713 Length=6249 Score = 199 bits (220), Expect = 4e-49 Identities = 159/190 (84%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||| |||||||||||||||| ||||||||| ||| | ||| ||||| Sbjct 2059 GGAACCAGGACTTTTGCTTTGAAAAAATTAGATTGTTCAAAGCTGGCTTATGCCTGAATA 2118 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| |||||||||||| ||||||| ||| | ||||||||||| ||||||||||| | Sbjct 2119 AATTAGCATGGAATAATAAAATAGGATGTGTGATTCTATTTTGTTGGTTTCTAGGA-CTA 2177 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 | ||||||||||||| || ||| ||||| | ||||| ||||||| ||||||||||| Sbjct 2178 CTGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTATTACATTGTCAGAGGTGAAATTC 2237 Query 181 TTGGATTTAT 190 ||||||| || Sbjct 2238 TTGGATTGAT 2247 >seq23453 Length=2616 Score = 187 bits (206), Expect = 3e-45 Identities = 156/190 (82%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||||||||||||||||||||||| || |||||||||| || | ||| ||||| Sbjct 169 GGAACCAGGACTTTTACTTTGAAAAAATTAAAGTGTTCAAAGCAAGCTTATGCCTGAATA 228 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 || || |||||||||||| ||||||| ||| | || |||||| | ||||||||||| Sbjct 229 CACTAGCATGGAATAATAAAATAGGATGTGTGATTATATTTTTTTGGTTTCTAGGA-TTA 287 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||||||||| || ||| ||||| | ||||| || |||| ||| ||||||| Sbjct 288 CCGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTATTACATCGTCAGAGGAGAAATTC 347 Query 181 TTGGATTTAT 190 ||||||| || Sbjct 348 TTGGATTGAT 357 >seq10590 Length=5551 Score = 187 bits (206), Expect = 3e-45 Identities = 149/178 (84%), Gaps = 1/178 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||| Sbjct 177 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATA 118 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||| ||||||| ||||||| ||| | ||||||||||| ||||||||||| Sbjct 117 CATTAGCATGAAATAATAAAATAGGATGTGTGATTCTATTTTGTTGGTTTCTAGGA-TTA 59 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAAT 178 |||||||||||||| || ||| ||||| | ||||| || |||| ||||||||| Sbjct 58 CCGTAATGATAAATGGGGTCAGTTGGGGGCATTTGTATTACATCGTCAGAGGTGAAAT 1 >seq9898 Length=5855 Score = 187 bits (206), Expect = 3e-45 Identities = 156/190 (82%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||||||||| ||||||||||||| || |||||||||| || | ||| ||||| Sbjct 3564 GGAACCAGGACTTTTAATTTGAAAAAATTAAAGTGTTCAAAGCAAGCTTATGCCTGAATA 3623 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||| ||||||| ||| | || |||||| | ||||||||||| Sbjct 3624 CATTAGCATGGAATAATAAAATAGGATGTGTGATTATATTTTTTTGGTTTCTAGGA-TTA 3682 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||||||||| || ||| ||||| | ||||| ||||| | ||| ||||||| Sbjct 3683 CCGTAATGATAAATAGGGTCAGTTGGGGGCATTTGTATTACATTGTGAGAGGAGAAATTC 3742 Query 181 TTGGATTTAT 190 ||||||| || Sbjct 3743 TTGGATTGAT 3752 >seq18020 Length=3442 Score = 109 bits (120), Expect = 6e-22 Identities = 69/75 (92%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 3 AACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACA 62 ||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||| Sbjct 75 AACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATACA 16 Query 63 TTACCATGGAATAAT 77 ||| ||||||||||| Sbjct 15 TTAGCATGGAATAAT 1 >seq29326 Length=2073 Score = 95.1 bits (104), Expect = 1e-17 Identities = 69/79 (87%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||||||| |||||||||||||||||| ||||||||||||| | ||| ||||| Sbjct 467 GGAACCAGGACTTTGACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTATGCCTGAATA 408 Query 61 CATTACCA-TGGAATAATA 78 ||||| || || || |||| Sbjct 407 CATTAGCATTGTAAAAATA 389 >seq14748 Length=4171 Score = 91.5 bits (100), Expect = 2e-16 Identities = 88/112 (79%), Gaps = 1/112 (1%) Strand=Plus/Plus Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 |||| ||||||| ||||||| ||| | |||||||| || ||||||||||| |||||| Sbjct 4061 CATGTAATAATAAAATAGGATGTGTGATTCTATTTGGTTGGTTTCTAGGA-TTACCGTAA 4119 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAAT 178 |||||||| || ||| ||||| | ||||| || |||| ||||||||| Sbjct 4120 TGATAAATGGGGTCAGTTGGGGGCATTTGTATTACATCGTCAGAGGTGAAAT 4171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511703704480