Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20]
59,737 sequences; 215,710,044 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq3532 297 4e-78
seq989 295 1e-77
seq3628 293 4e-77
seq17943 273 4e-71
seq54988 246 6e-63
seq17376 235 1e-59
>seq3532
Length=11102
Score = 297 bits (328), Expect = 4e-78
Identities = 225/264 (85%), Gaps = 1/264 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||| |||||||||||| | || ||| |||| || || | ||||||||
Sbjct 3 GAACGAGACCTTCTCCTGCTAAATAGTCCAGCTGGCTATGGCTGGCTGCTGACTTCTTAG 62
Query 80 AGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
|||||||||| || || |||||||||| ||||||||||||||||||||||||||||
Sbjct 63 AGGGACTATCAACTTTTAGTTGATGGAAGTTGGAGGCAATAACAGGTCTGTGATGCCCTT 122
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |
Sbjct 123 AGATGTTCTGGGCCGCACGCGCGCTACACTGACCAAGCCAGCGAGTATATCACCTTATCT 182
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| || | ||||||||||||| ||||| |||||| ||||||||||||||||||||||||
Sbjct 183 GAAAAGATTGGGTAATCTTGTGAAACTTGGTCGTGATGGGGATAGAGCATTGCAATTATT 242
Query 259 GCTCTTCAACGAGGAATGCCTAGT 282
||||||||||||||||| ||||||
Sbjct 243 GCTCTTCAACGAGGAATACCTAGT 266
>seq989
Length=17883
Score = 295 bits (326), Expect = 1e-77
Identities = 253/310 (82%), Gaps = 2/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||| || ||||||||| | || ||| |||| || || | ||||||||
Sbjct 3431 GAACGAGACCTTCTCCGGCTAAATAGTCCAGCTGGCTATGGCTGGCTGCTGACTTCTTAG 3372
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
|||||||||| | | || ||| ||||| ||||||||||||||||||||||||||||
Sbjct 3371 AGGGACTATCAACGTTTAGTTGATTGAAGTGGGAGGCAATAACAGGTCTGTGATGCCCTT 3312
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
|||||||||||| ||||| ||||||||||||| ||||| ||||| ||| |||| |
Sbjct 3311 CGATGTTCTGGGCTGCACGAGCGCTACACTGACCAAGCCAGCGAGTATATC-CCTTATCG 3253
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| || | ||||||||||||| ||||| || ||| |||||||||| |||||||||||||
Sbjct 3252 GAAAAGATTGGGTAATCTTGTGAAACTTGGTTGTGATGGGGATAGATCATTGCAATTATT 3193
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||| |||||||| | ||||||||| | | |||||||| ||||||
Sbjct 3192 GCTCTTCAACGAGGAATACCTAGTAAACATATGTCATCAGAATGTGTTGATTATGTCCCT 3133
Query 319 GCCCTTTGTA 328
||| ||||||
Sbjct 3132 GCCATTTGTA 3123
>seq3628
Length=10935
Score = 293 bits (324), Expect = 4e-77
Identities = 250/310 (81%), Gaps = 14/310 (5%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||| |||||||||||| | || ||| |||| || || | ||||||||
Sbjct 7321 GAACGAGACCTTCTCCTGCTAAATAGTCCAGCTGGCTATGGCTGGCTGCTGACTTCTTAG 7380
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
|||||||||| | | || |||||||||| ||||||||||||||||||||||||||||
Sbjct 7381 AGGGACTATCAACGTTTAGTTGATGGAAGTTGGAGGCAATAACAGGTCTGTGATGCCCTT 7440
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| ||||| ||||| | |||||| |
Sbjct 7441 AGATGTTCTGGGCCGCACGCGCGCTACACTGACCAAGCCAGCGAGTATACCACCTTATCT 7500
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| || | ||||||||| ||||| |||||||||||| |||||||||||
Sbjct 7501 GAAAAGATTGGGTAATC-------------TCGTGATGGGGATAGAGCCTTGCAATTATT 7547
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
|||||||||| |||||| |||||||| | ||||||||||| |||||||||| ||||
Sbjct 7548 GCTCTTCAACAAGGAATACCTAGTAAACATATGTCATCAGCATATGTTGATTACGACCCT 7607
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 7608 GCCCTTTGTA 7617
Score = 273 bits (302), Expect = 4e-71
Identities = 195/223 (87%), Gaps = 1/223 (0%)
Strand=Plus/Plus
Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165
|||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 7698 AGTTGGAGGCAATAACAGGTCTGTGATGCCCTC-GATGTTCTGGGCCGCACGCGCACTAC 7756
Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225
|||||| ||||| ||| | |||||||| | | || | ||||||||||||| |||||
Sbjct 7757 ACTGACCAAGCCAGCGATTATATCACCTTATCTGAAAAGATTGGGTAATCTTGTGAAACT 7816
Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285
|||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 7817 TGGTCGTGATGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATACCTAGTAAA 7876
Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||||||||| | |||||||||||||||||||||||||
Sbjct 7877 CATATGTCATCAGCATGTGTTGATTACGTCCCTGCCCTTTGTA 7919
>seq17943
Length=3454
Score = 273 bits (302), Expect = 4e-71
Identities = 198/229 (86%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 100 GATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCG 159
|||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 2861 GATGGAAGTTGGAGGCAATAACAGGTCTGTGATGCCCTGAGATGTTCTGGGCCACACGCG 2802
Query 160 CGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGT 219
|||||||||||| |||| |||| |||||| | | | || | |||||||||||||
Sbjct 2801 CGCTACACTGACCAAGCCGGAGAGTATATCACCATATCTGAAAAGATTGGGTAATCTTGT 2742
Query 220 TAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCT 279
||||| |||||| |||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 2741 GAAACTTGGTCGTGATGGGGATAGAGCATTGCAATTATTGCTCTTCAACAAGGAATACCT 2682
Query 280 AGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
||||| | ||||||||||| | |||||||||||||||||||||| ||
Sbjct 2681 AGTAAACATATGTCATCAGCATGTGTTGATTACGTCCCTGCCCTTTCTA 2633
>seq54988
Length=1073
Score = 246 bits (272), Expect = 6e-63
Identities = 172/196 (88%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192
||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct 548 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACCAAGCCAGCGAGTATATCACC 489
Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252
|| | | || | |||||||||||| ||||| |||||| ||||||||||||||||||
Sbjct 488 TTATCTGAAAAGATCGGGTAATCTTGTAAAACTTGGTCGTGATGGGGATAGAGCATTGCA 429
Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312
||||||||||||||||||||||| |||||||| | ||||||||||| | |||||||||
Sbjct 428 ATTATTGCTCTTCAACGAGGAATACCTAGTAAACATATGTCATCAGCATGTGTTGATTAC 369
Query 313 GTCCCTGCCCTTTGTA 328
||||||||||||||||
Sbjct 368 GTCCCTGCCCTTTGTA 353
>seq17376
Length=3568
Score = 235 bits (260), Expect = 1e-59
Identities = 171/198 (86%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||||||||||||||||| |||||||||||| ||||| |||| ||||
Sbjct 1937 ATGCCCTTAGATGTTCTGGGCCGCACGCACGCTACACTGACCAAGCCAGTGAGTATATCA 1996
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|||| | | || | ||||||||||||| ||||| |||||| ||||||||||||||||
Sbjct 1997 CCTTATCTGAAAAGATTGGGTAATCTTGTGAAACTTGGTCGTGATGGGGATAGAGCATTG 2056
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||||||||||||| ||||||| || ||||| | ||||||||||| | |||||||
Sbjct 2057 CAATTATTGCTCTTCAAAGAGGAATACCCAGTAAACATATGTCATCAGCATGTGTTGATT 2116
Query 311 ACGTCCCTGCCCTTTGTA 328
||||||||||||||||||
Sbjct 2117 ACGTCCCTGCCCTTTGTA 2134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946634171136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |