Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3532 297 4e-78 seq989 295 1e-77 seq3628 293 4e-77 seq17943 273 4e-71 seq54988 246 6e-63 seq17376 235 1e-59 >seq3532 Length=11102 Score = 297 bits (328), Expect = 4e-78 Identities = 225/264 (85%), Gaps = 1/264 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||| |||||||||||| | || ||| |||| || || | |||||||| Sbjct 3 GAACGAGACCTTCTCCTGCTAAATAGTCCAGCTGGCTATGGCTGGCTGCTGACTTCTTAG 62 Query 80 AGGGACTATCGGCTCA-AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||| || || |||||||||| |||||||||||||||||||||||||||| Sbjct 63 AGGGACTATCAACTTTTAGTTGATGGAAGTTGGAGGCAATAACAGGTCTGTGATGCCCTT 122 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| | Sbjct 123 AGATGTTCTGGGCCGCACGCGCGCTACACTGACCAAGCCAGCGAGTATATCACCTTATCT 182 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | || | ||||||||||||| ||||| |||||| |||||||||||||||||||||||| Sbjct 183 GAAAAGATTGGGTAATCTTGTGAAACTTGGTCGTGATGGGGATAGAGCATTGCAATTATT 242 Query 259 GCTCTTCAACGAGGAATGCCTAGT 282 ||||||||||||||||| |||||| Sbjct 243 GCTCTTCAACGAGGAATACCTAGT 266 >seq989 Length=17883 Score = 295 bits (326), Expect = 1e-77 Identities = 253/310 (82%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||| || ||||||||| | || ||| |||| || || | |||||||| Sbjct 3431 GAACGAGACCTTCTCCGGCTAAATAGTCCAGCTGGCTATGGCTGGCTGCTGACTTCTTAG 3372 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||| | | || ||| ||||| |||||||||||||||||||||||||||| Sbjct 3371 AGGGACTATCAACGTTTAGTTGATTGAAGTGGGAGGCAATAACAGGTCTGTGATGCCCTT 3312 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 |||||||||||| ||||| ||||||||||||| ||||| ||||| ||| |||| | Sbjct 3311 CGATGTTCTGGGCTGCACGAGCGCTACACTGACCAAGCCAGCGAGTATATC-CCTTATCG 3253 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | || | ||||||||||||| ||||| || ||| |||||||||| ||||||||||||| Sbjct 3252 GAAAAGATTGGGTAATCTTGTGAAACTTGGTTGTGATGGGGATAGATCATTGCAATTATT 3193 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 ||||||||||||||||| |||||||| | ||||||||| | | |||||||| |||||| Sbjct 3192 GCTCTTCAACGAGGAATACCTAGTAAACATATGTCATCAGAATGTGTTGATTATGTCCCT 3133 Query 319 GCCCTTTGTA 328 ||| |||||| Sbjct 3132 GCCATTTGTA 3123 >seq3628 Length=10935 Score = 293 bits (324), Expect = 4e-77 Identities = 250/310 (81%), Gaps = 14/310 (5%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||| |||||||||||| | || ||| |||| || || | |||||||| Sbjct 7321 GAACGAGACCTTCTCCTGCTAAATAGTCCAGCTGGCTATGGCTGGCTGCTGACTTCTTAG 7380 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 |||||||||| | | || |||||||||| |||||||||||||||||||||||||||| Sbjct 7381 AGGGACTATCAACGTTTAGTTGATGGAAGTTGGAGGCAATAACAGGTCTGTGATGCCCTT 7440 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| ||||| ||||| | |||||| | Sbjct 7441 AGATGTTCTGGGCCGCACGCGCGCTACACTGACCAAGCCAGCGAGTATACCACCTTATCT 7500 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | || | ||||||||| ||||| |||||||||||| ||||||||||| Sbjct 7501 GAAAAGATTGGGTAATC-------------TCGTGATGGGGATAGAGCCTTGCAATTATT 7547 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 |||||||||| |||||| |||||||| | ||||||||||| |||||||||| |||| Sbjct 7548 GCTCTTCAACAAGGAATACCTAGTAAACATATGTCATCAGCATATGTTGATTACGACCCT 7607 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 7608 GCCCTTTGTA 7617 Score = 273 bits (302), Expect = 4e-71 Identities = 195/223 (87%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct 7698 AGTTGGAGGCAATAACAGGTCTGTGATGCCCTC-GATGTTCTGGGCCGCACGCGCACTAC 7756 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 |||||| ||||| ||| | |||||||| | | || | ||||||||||||| ||||| Sbjct 7757 ACTGACCAAGCCAGCGATTATATCACCTTATCTGAAAAGATTGGGTAATCTTGTGAAACT 7816 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 7817 TGGTCGTGATGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATACCTAGTAAA 7876 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||||||||| | ||||||||||||||||||||||||| Sbjct 7877 CATATGTCATCAGCATGTGTTGATTACGTCCCTGCCCTTTGTA 7919 >seq17943 Length=3454 Score = 273 bits (302), Expect = 4e-71 Identities = 198/229 (86%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 100 GATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCG 159 |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 2861 GATGGAAGTTGGAGGCAATAACAGGTCTGTGATGCCCTGAGATGTTCTGGGCCACACGCG 2802 Query 160 CGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGT 219 |||||||||||| |||| |||| |||||| | | | || | ||||||||||||| Sbjct 2801 CGCTACACTGACCAAGCCGGAGAGTATATCACCATATCTGAAAAGATTGGGTAATCTTGT 2742 Query 220 TAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCT 279 ||||| |||||| |||||||||||||||||||||||||||||||||| |||||| ||| Sbjct 2741 GAAACTTGGTCGTGATGGGGATAGAGCATTGCAATTATTGCTCTTCAACAAGGAATACCT 2682 Query 280 AGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| | ||||||||||| | |||||||||||||||||||||| || Sbjct 2681 AGTAAACATATGTCATCAGCATGTGTTGATTACGTCCCTGCCCTTTCTA 2633 >seq54988 Length=1073 Score = 246 bits (272), Expect = 6e-63 Identities = 172/196 (88%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 ||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct 548 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACCAAGCCAGCGAGTATATCACC 489 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 || | | || | |||||||||||| ||||| |||||| |||||||||||||||||| Sbjct 488 TTATCTGAAAAGATCGGGTAATCTTGTAAAACTTGGTCGTGATGGGGATAGAGCATTGCA 429 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 ||||||||||||||||||||||| |||||||| | ||||||||||| | ||||||||| Sbjct 428 ATTATTGCTCTTCAACGAGGAATACCTAGTAAACATATGTCATCAGCATGTGTTGATTAC 369 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 368 GTCCCTGCCCTTTGTA 353 >seq17376 Length=3568 Score = 235 bits (260), Expect = 1e-59 Identities = 171/198 (86%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||||||||||||||||| |||||||||||| ||||| |||| |||| Sbjct 1937 ATGCCCTTAGATGTTCTGGGCCGCACGCACGCTACACTGACCAAGCCAGTGAGTATATCA 1996 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| | | || | ||||||||||||| ||||| |||||| |||||||||||||||| Sbjct 1997 CCTTATCTGAAAAGATTGGGTAATCTTGTGAAACTTGGTCGTGATGGGGATAGAGCATTG 2056 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||||||||||| ||||||| || ||||| | ||||||||||| | ||||||| Sbjct 2057 CAATTATTGCTCTTCAAAGAGGAATACCCAGTAAACATATGTCATCAGCATGTGTTGATT 2116 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 2117 ACGTCCCTGCCCTTTGTA 2134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946634171136