Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Uromyces_20viciae-fabae_20[genbank_20GCA_5F000785685.1_202014-11-20] 59,737 sequences; 215,710,044 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq12400 113 4e-20 seq195 109 4e-19 >seq12400 Length=4870 Score = 113 bits (124), Expect = 4e-20 Identities = 163/224 (73%), Gaps = 7/224 (3%) Strand=Plus/Minus Query 61099 TACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATG 61158 |||||| || |||||||| || ||||||| ||| || | ||| | || ||||||||| Sbjct 2192 TACAAACGCGCCGAAGCTTCGTTTTGGACGGCGGAAGAAATTGATCTATCTAAAGACATG 2133 Query 61159 AATGACTGGGAGCGTTTATCGA---GCGGT-GAACAACATTTCATTAAACATGTGTTGGC 61214 | || ||||| | | | | |||| || ||||||||||||| ||||| | || Sbjct 2132 CACGATTGGGA-CAAAAAACTAAATGCGGACGAGAAACATTTCATTAAGCATGTTCTTGC 2074 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC-GCGCAGG 61273 ||||| || || || || || ||||||||||||||| || | || | ||| ||| | | Sbjct 2073 ATTCTTCGCTGCCTCAGATGGCATCGTCAATGAGAATCTAATTGAGAGATTCAGCGGA-G 2015 Query 61274 AGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATT 61317 | || ||| | |||| || |||||||| |||||||| || ||| Sbjct 2014 AAGTTCAAATTGCGGAAGCACGTTGTTTTTACGGCTTTCAAATT 1971 >seq195 Length=27450 Score = 109 bits (120), Expect = 4e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 66326 TGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCT 66385 ||||| || || |||||| | |||||| |||||||| ||||| ||||| || || ||| Sbjct 5713 TGTTCAACTCGTGTCATAAACAAATCAGGAATCCAGAGCGCGTAAAAGAGGTCCCGAGCT 5772 Query 66386 CGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGC 66445 || | || || | ||||||||||| | || ||| | | |||||||| || |||||| Sbjct 5773 CGATTTTCTTCCTTTCCGTGATTTTTTCTCAGGTCTAACCAGTCAAAGATATCTGCATGC 5832 Query 66446 CATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAG 66505 |||||||| || ||||| || || | ||| | ||| |||||| || || || || Sbjct 5833 CATGGTTCAAGATAGATAGCAAAAGCGCCGGGTCTCTTGTTGCCACCCTGATCAACATAC 5892 Query 66506 CGAGC 66510 || || Sbjct 5893 CGCGC 5897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397278552729680