Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900080155.1_202016-11-03] 24 sequences; 20,625,025 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq20 122 5e-26 >seq20 Length=656372 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 5/120 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||||||||||||| | ||||| |||| || |||||| ||||| Sbjct 310440 GAACCCAAAAACTTTGATTTCTCGTACCGCGCCGATCGAGCCAGTGAAATGAG--CATCG 310383 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| | |||||||||||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 310382 ACCGATTCGGAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTCGA 310323 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 5/120 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||||||||||||| | ||||| |||| || |||||| ||||| Sbjct 318586 GAACCCAAAAACTTTGATTTCTCGTACCGCGCCGATCGAGCCAGTGAAATGAG--CATCG 318529 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| | |||||||||||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 318528 ACCGATTCGGAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTCGA 318469 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 5/120 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||||||||||||| | ||||| |||| || |||||| ||||| Sbjct 326732 GAACCCAAAAACTTTGATTTCTCGTACCGCGCCGATCGAGCCAGTGAAATGAG--CATCG 326675 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| | |||||||||||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 326674 ACCGATTCGGAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTCGA 326615 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 5/120 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||||||||||||| | ||||| |||| || |||||| ||||| Sbjct 334878 GAACCCAAAAACTTTGATTTCTCGTACCGCGCCGATCGAGCCAGTGAAATGAG--CATCG 334821 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| | |||||||||||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 334820 ACCGATTCGGAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTCGA 334761 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 5/120 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||||||||||||| | ||||| |||| || |||||| ||||| Sbjct 343024 GAACCCAAAAACTTTGATTTCTCGTACCGCGCCGATCGAGCCAGTGAAATGAG--CATCG 342967 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| | |||||||||||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 342966 ACCGATTCGGAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTCGA 342907 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 5/120 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||||||||||||| | ||||| |||| || |||||| ||||| Sbjct 351170 GAACCCAAAAACTTTGATTTCTCGTACCGCGCCGATCGAGCCAGTGAAATGAG--CATCG 351113 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| | |||||||||||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 351112 ACCGATTCGGAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTCGA 351053 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 5/120 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||||||||||||| | ||||| |||| || |||||| ||||| Sbjct 359316 GAACCCAAAAACTTTGATTTCTCGTACCGCGCCGATCGAGCCAGTGAAATGAG--CATCG 359259 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| | |||||||||||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 359258 ACCGATTCGGAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTCGA 359199 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 5/120 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||||||||||||| | ||||| |||| || |||||| ||||| Sbjct 367462 GAACCCAAAAACTTTGATTTCTCGTACCGCGCCGATCGAGCCAGTGAAATGAG--CATCG 367405 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| | |||||||||||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 367404 ACCGATTCGGAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTCGA 367345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399937360