Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900080155.1_202016-11-03] 24 sequences; 20,625,025 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq20 453 2e-125 seq5 100 5e-19 >seq20 Length=656372 Score = 453 bits (502), Expect = 2e-125 Identities = 279/296 (94%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCA-TCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| || | || ||| |||||||||||||||||||||||||| Sbjct 315276 TACTAAGTTGAATTACTGTTACGATAACCCTCAATCAGTAGGGTAAAACTAACCTGTCTC 315217 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 315216 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 315157 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 315156 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 315097 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 315096 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 315037 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 315036 TCAAATGCCGAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 314981 Score = 453 bits (502), Expect = 2e-125 Identities = 279/296 (94%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCA-TCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| || | || ||| |||||||||||||||||||||||||| Sbjct 323422 TACTAAGTTGAATTACTGTTACGATAACCCTCAATCAGTAGGGTAAAACTAACCTGTCTC 323363 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 323362 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 323303 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 323302 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 323243 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 323242 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 323183 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 323182 TCAAATGCCGAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 323127 Score = 453 bits (502), Expect = 2e-125 Identities = 279/296 (94%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCA-TCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| || | || ||| |||||||||||||||||||||||||| Sbjct 331568 TACTAAGTTGAATTACTGTTACGATAACCCTCAATCAGTAGGGTAAAACTAACCTGTCTC 331509 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 331508 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 331449 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 331448 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 331389 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 331388 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 331329 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 331328 TCAAATGCCGAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 331273 Score = 453 bits (502), Expect = 2e-125 Identities = 279/296 (94%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCA-TCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| || | || ||| |||||||||||||||||||||||||| Sbjct 339714 TACTAAGTTGAATTACTGTTACGATAACCCTCAATCAGTAGGGTAAAACTAACCTGTCTC 339655 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 339654 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 339595 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 339594 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 339535 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 339534 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 339475 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 339474 TCAAATGCCGAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 339419 Score = 453 bits (502), Expect = 2e-125 Identities = 279/296 (94%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCA-TCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| || | || ||| |||||||||||||||||||||||||| Sbjct 347860 TACTAAGTTGAATTACTGTTACGATAACCCTCAATCAGTAGGGTAAAACTAACCTGTCTC 347801 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 347800 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 347741 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 347740 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 347681 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 347680 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 347621 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 347620 TCAAATGCCGAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 347565 Score = 453 bits (502), Expect = 2e-125 Identities = 279/296 (94%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCA-TCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| || | || ||| |||||||||||||||||||||||||| Sbjct 356006 TACTAAGTTGAATTACTGTTACGATAACCCTCAATCAGTAGGGTAAAACTAACCTGTCTC 355947 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 355946 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 355887 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 355886 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 355827 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 355826 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 355767 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 355766 TCAAATGCCGAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 355711 Score = 453 bits (502), Expect = 2e-125 Identities = 279/296 (94%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCA-TCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| || | || ||| |||||||||||||||||||||||||| Sbjct 364152 TACTAAGTTGAATTACTGTTACGATAACCCTCAATCAGTAGGGTAAAACTAACCTGTCTC 364093 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 364092 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 364033 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 364032 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 363973 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 363972 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 363913 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 363912 TCAAATGCCGAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 363857 Score = 453 bits (502), Expect = 2e-125 Identities = 279/296 (94%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCA-TCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| || | || ||| |||||||||||||||||||||||||| Sbjct 372298 TACTAAGTTGAATTACTGTTACGATAACCCTCAATCAGTAGGGTAAAACTAACCTGTCTC 372239 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 372238 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 372179 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 372178 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 372119 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 372118 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 372059 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 372058 TCAAATGCCGAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 372003 >seq5 Length=755036 Score = 100 bits (110), Expect = 5e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 118 CGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 236834 CGAATTCTGCTTCGATATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCATCGTCGC 236775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399794944