Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilago_20bromivora_20[genbank_20GCA_5F900080155.1_202016-11-03]
24 sequences; 20,625,025 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq20 152 6e-35
>seq20
Length=656372
Score = 152 bits (168), Expect = 6e-35
Identities = 104/116 (90%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64
|||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||
Sbjct 310180 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 310121
Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119
|||| || |||||||||||||||||||||||| |||| |||| |||||||||||
Sbjct 310120 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 310065
Score = 152 bits (168), Expect = 6e-35
Identities = 104/116 (90%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64
|||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||
Sbjct 318326 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 318267
Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119
|||| || |||||||||||||||||||||||| |||| |||| |||||||||||
Sbjct 318266 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 318211
Score = 152 bits (168), Expect = 6e-35
Identities = 104/116 (90%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64
|||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||
Sbjct 326472 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 326413
Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119
|||| || |||||||||||||||||||||||| |||| |||| |||||||||||
Sbjct 326412 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 326357
Score = 152 bits (168), Expect = 6e-35
Identities = 104/116 (90%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64
|||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||
Sbjct 334618 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 334559
Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119
|||| || |||||||||||||||||||||||| |||| |||| |||||||||||
Sbjct 334558 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 334503
Score = 152 bits (168), Expect = 6e-35
Identities = 104/116 (90%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64
|||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||
Sbjct 342764 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 342705
Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119
|||| || |||||||||||||||||||||||| |||| |||| |||||||||||
Sbjct 342704 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 342649
Score = 152 bits (168), Expect = 6e-35
Identities = 104/116 (90%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64
|||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||
Sbjct 350910 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 350851
Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119
|||| || |||||||||||||||||||||||| |||| |||| |||||||||||
Sbjct 350850 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 350795
Score = 152 bits (168), Expect = 6e-35
Identities = 104/116 (90%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64
|||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||
Sbjct 359056 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 358997
Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119
|||| || |||||||||||||||||||||||| |||| |||| |||||||||||
Sbjct 358996 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 358941
Score = 152 bits (168), Expect = 6e-35
Identities = 104/116 (90%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64
|||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||
Sbjct 367202 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 367143
Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119
|||| || |||||||||||||||||||||||| |||| |||| |||||||||||
Sbjct 367142 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 367087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595199861616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |