Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900080155.1_202016-11-03] 24 sequences; 20,625,025 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq20 152 6e-35 >seq20 Length=656372 Score = 152 bits (168), Expect = 6e-35 Identities = 104/116 (90%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| Sbjct 310180 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 310121 Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| || |||||||||||||||||||||||| |||| |||| ||||||||||| Sbjct 310120 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 310065 Score = 152 bits (168), Expect = 6e-35 Identities = 104/116 (90%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| Sbjct 318326 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 318267 Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| || |||||||||||||||||||||||| |||| |||| ||||||||||| Sbjct 318266 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 318211 Score = 152 bits (168), Expect = 6e-35 Identities = 104/116 (90%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| Sbjct 326472 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 326413 Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| || |||||||||||||||||||||||| |||| |||| ||||||||||| Sbjct 326412 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 326357 Score = 152 bits (168), Expect = 6e-35 Identities = 104/116 (90%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| Sbjct 334618 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 334559 Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| || |||||||||||||||||||||||| |||| |||| ||||||||||| Sbjct 334558 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 334503 Score = 152 bits (168), Expect = 6e-35 Identities = 104/116 (90%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| Sbjct 342764 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 342705 Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| || |||||||||||||||||||||||| |||| |||| ||||||||||| Sbjct 342704 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 342649 Score = 152 bits (168), Expect = 6e-35 Identities = 104/116 (90%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| Sbjct 350910 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 350851 Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| || |||||||||||||||||||||||| |||| |||| ||||||||||| Sbjct 350850 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 350795 Score = 152 bits (168), Expect = 6e-35 Identities = 104/116 (90%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| Sbjct 359056 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 358997 Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| || |||||||||||||||||||||||| |||| |||| ||||||||||| Sbjct 358996 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 358941 Score = 152 bits (168), Expect = 6e-35 Identities = 104/116 (90%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| Sbjct 367202 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 367143 Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| || |||||||||||||||||||||||| |||| |||| ||||||||||| Sbjct 367142 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATGGTCCTGGTTCC 367087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199861616