Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900080155.1_202016-11-03] 24 sequences; 20,625,025 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq20 311 2e-82 >seq20 Length=656372 Score = 311 bits (344), Expect = 2e-82 Identities = 261/317 (82%), Gaps = 10/317 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC--TTTGGCGGGTCGCC----GGCT 73 || ||||||||| ||||||||||||| | || | |||| || | || | || Sbjct 311054 GAACGAGACCTTGACCTGCTAAATAGACGGGTTGACAATTTGTTGG--CCCCTTATGTCT 311111 Query 74 TCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| |||| | || || |||||| | |||||||||||||||||||| Sbjct 311112 TCTTAGAGGGACAATCGACCGTCTAGGTGATGGAGGCAAAAGGCAATAACAGGTCTGTGA 311171 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||||| |||| ||||||||||||||||||||||| |||||||| || | Sbjct 311172 TGCCCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTGGTTCCC 311231 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| ||| || | |||||||| ||||| ||||| ||||||||||||||| |||| ||| Sbjct 311232 CTTGTCCGAAATGACTGGGTAAACTTGTGAAACTTTGTCGTGCTGGGGATGGAGCTTTGT 311291 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||| || Sbjct 311292 AATTTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGACTA 311351 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 311352 CGTCCCTGCCCTTTGTA 311368 Score = 311 bits (344), Expect = 2e-82 Identities = 261/317 (82%), Gaps = 10/317 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC--TTTGGCGGGTCGCC----GGCT 73 || ||||||||| ||||||||||||| | || | |||| || | || | || Sbjct 319200 GAACGAGACCTTGACCTGCTAAATAGACGGGTTGACAATTTGTTGG--CCCCTTATGTCT 319257 Query 74 TCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| |||| | || || |||||| | |||||||||||||||||||| Sbjct 319258 TCTTAGAGGGACAATCGACCGTCTAGGTGATGGAGGCAAAAGGCAATAACAGGTCTGTGA 319317 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||||| |||| ||||||||||||||||||||||| |||||||| || | Sbjct 319318 TGCCCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTGGTTCCC 319377 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| ||| || | |||||||| ||||| ||||| ||||||||||||||| |||| ||| Sbjct 319378 CTTGTCCGAAATGACTGGGTAAACTTGTGAAACTTTGTCGTGCTGGGGATGGAGCTTTGT 319437 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||| || Sbjct 319438 AATTTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGACTA 319497 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 319498 CGTCCCTGCCCTTTGTA 319514 Score = 311 bits (344), Expect = 2e-82 Identities = 261/317 (82%), Gaps = 10/317 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC--TTTGGCGGGTCGCC----GGCT 73 || ||||||||| ||||||||||||| | || | |||| || | || | || Sbjct 327346 GAACGAGACCTTGACCTGCTAAATAGACGGGTTGACAATTTGTTGG--CCCCTTATGTCT 327403 Query 74 TCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| |||| | || || |||||| | |||||||||||||||||||| Sbjct 327404 TCTTAGAGGGACAATCGACCGTCTAGGTGATGGAGGCAAAAGGCAATAACAGGTCTGTGA 327463 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||||| |||| ||||||||||||||||||||||| |||||||| || | Sbjct 327464 TGCCCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTGGTTCCC 327523 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| ||| || | |||||||| ||||| ||||| ||||||||||||||| |||| ||| Sbjct 327524 CTTGTCCGAAATGACTGGGTAAACTTGTGAAACTTTGTCGTGCTGGGGATGGAGCTTTGT 327583 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||| || Sbjct 327584 AATTTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGACTA 327643 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 327644 CGTCCCTGCCCTTTGTA 327660 Score = 311 bits (344), Expect = 2e-82 Identities = 261/317 (82%), Gaps = 10/317 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC--TTTGGCGGGTCGCC----GGCT 73 || ||||||||| ||||||||||||| | || | |||| || | || | || Sbjct 335492 GAACGAGACCTTGACCTGCTAAATAGACGGGTTGACAATTTGTTGG--CCCCTTATGTCT 335549 Query 74 TCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| |||| | || || |||||| | |||||||||||||||||||| Sbjct 335550 TCTTAGAGGGACAATCGACCGTCTAGGTGATGGAGGCAAAAGGCAATAACAGGTCTGTGA 335609 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||||| |||| ||||||||||||||||||||||| |||||||| || | Sbjct 335610 TGCCCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTGGTTCCC 335669 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| ||| || | |||||||| ||||| ||||| ||||||||||||||| |||| ||| Sbjct 335670 CTTGTCCGAAATGACTGGGTAAACTTGTGAAACTTTGTCGTGCTGGGGATGGAGCTTTGT 335729 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||| || Sbjct 335730 AATTTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGACTA 335789 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 335790 CGTCCCTGCCCTTTGTA 335806 Score = 311 bits (344), Expect = 2e-82 Identities = 261/317 (82%), Gaps = 10/317 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC--TTTGGCGGGTCGCC----GGCT 73 || ||||||||| ||||||||||||| | || | |||| || | || | || Sbjct 343638 GAACGAGACCTTGACCTGCTAAATAGACGGGTTGACAATTTGTTGG--CCCCTTATGTCT 343695 Query 74 TCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| |||| | || || |||||| | |||||||||||||||||||| Sbjct 343696 TCTTAGAGGGACAATCGACCGTCTAGGTGATGGAGGCAAAAGGCAATAACAGGTCTGTGA 343755 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||||| |||| ||||||||||||||||||||||| |||||||| || | Sbjct 343756 TGCCCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTGGTTCCC 343815 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| ||| || | |||||||| ||||| ||||| ||||||||||||||| |||| ||| Sbjct 343816 CTTGTCCGAAATGACTGGGTAAACTTGTGAAACTTTGTCGTGCTGGGGATGGAGCTTTGT 343875 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||| || Sbjct 343876 AATTTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGACTA 343935 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 343936 CGTCCCTGCCCTTTGTA 343952 Score = 311 bits (344), Expect = 2e-82 Identities = 261/317 (82%), Gaps = 10/317 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC--TTTGGCGGGTCGCC----GGCT 73 || ||||||||| ||||||||||||| | || | |||| || | || | || Sbjct 351784 GAACGAGACCTTGACCTGCTAAATAGACGGGTTGACAATTTGTTGG--CCCCTTATGTCT 351841 Query 74 TCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| |||| | || || |||||| | |||||||||||||||||||| Sbjct 351842 TCTTAGAGGGACAATCGACCGTCTAGGTGATGGAGGCAAAAGGCAATAACAGGTCTGTGA 351901 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||||| |||| ||||||||||||||||||||||| |||||||| || | Sbjct 351902 TGCCCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTGGTTCCC 351961 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| ||| || | |||||||| ||||| ||||| ||||||||||||||| |||| ||| Sbjct 351962 CTTGTCCGAAATGACTGGGTAAACTTGTGAAACTTTGTCGTGCTGGGGATGGAGCTTTGT 352021 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||| || Sbjct 352022 AATTTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGACTA 352081 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 352082 CGTCCCTGCCCTTTGTA 352098 Score = 311 bits (344), Expect = 2e-82 Identities = 261/317 (82%), Gaps = 10/317 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC--TTTGGCGGGTCGCC----GGCT 73 || ||||||||| ||||||||||||| | || | |||| || | || | || Sbjct 359930 GAACGAGACCTTGACCTGCTAAATAGACGGGTTGACAATTTGTTGG--CCCCTTATGTCT 359987 Query 74 TCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| |||| | || || |||||| | |||||||||||||||||||| Sbjct 359988 TCTTAGAGGGACAATCGACCGTCTAGGTGATGGAGGCAAAAGGCAATAACAGGTCTGTGA 360047 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||||| |||| ||||||||||||||||||||||| |||||||| || | Sbjct 360048 TGCCCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTGGTTCCC 360107 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| ||| || | |||||||| ||||| ||||| ||||||||||||||| |||| ||| Sbjct 360108 CTTGTCCGAAATGACTGGGTAAACTTGTGAAACTTTGTCGTGCTGGGGATGGAGCTTTGT 360167 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||| || Sbjct 360168 AATTTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGACTA 360227 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 360228 CGTCCCTGCCCTTTGTA 360244 Score = 311 bits (344), Expect = 2e-82 Identities = 261/317 (82%), Gaps = 10/317 (3%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC--TTTGGCGGGTCGCC----GGCT 73 || ||||||||| ||||||||||||| | || | |||| || | || | || Sbjct 368076 GAACGAGACCTTGACCTGCTAAATAGACGGGTTGACAATTTGTTGG--CCCCTTATGTCT 368133 Query 74 TCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||| |||| | || || |||||| | |||||||||||||||||||| Sbjct 368134 TCTTAGAGGGACAATCGACCGTCTAGGTGATGGAGGCAAAAGGCAATAACAGGTCTGTGA 368193 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 ||||||||||||||| |||| ||||||||||||||||||||||| |||||||| || | Sbjct 368194 TGCCCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTGGTTCCC 368253 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||| ||| || | |||||||| ||||| ||||| ||||||||||||||| |||| ||| Sbjct 368254 CTTGTCCGAAATGACTGGGTAAACTTGTGAAACTTTGTCGTGCTGGGGATGGAGCTTTGT 368313 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| ||||||||||||||||||| |||||||||||| ||||||||| ||||||| || Sbjct 368314 AATTTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGACTA 368373 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 368374 CGTCCCTGCCCTTTGTA 368390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199772672