Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900101485.1_202016-11-05] 2,546 sequences; 20,775,628 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq2416 109 1e-21 >seq2416 Length=13067 Score = 109 bits (120), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 6/202 (3%) Strand=Plus/Minus Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCC 254 ||| ||| ||||||||||||||| ||||||||||| |||| | | |||| Sbjct 2406 AAACTAACTCGCTGACCCATTATGCAAAAGGTACGTTGTCATTTTT-ACTTTTAACTCCA 2348 Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC-TCTCCGGGGTTCTTTTC 313 ||||||| || | ||| |||||| ||||||||||| | ||| | | |||||| Sbjct 2347 ACTGCTTATAGGATTACTAGTTCAGGTTCTATTTCACTAGTCATCTACT---TACTTTTC 2291 Query 314 GCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGA 373 |||||| |||||| |||| | |||||||| | | || || |||||||||||||| Sbjct 2290 ACCTTTCACTCACGTTACTC-TCCACTATCGCTAGATATGTTATACTTAGCCTTGGAGGA 2232 Query 374 TGGTCCCCCCATATTCAGACAA 395 |||| ||||| |||||| |||| Sbjct 2231 TGGTACCCCCTTATTCATACAA 2210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241568388864