Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900101485.1_202016-11-05] 2,546 sequences; 20,775,628 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq611 109 3e-22 seq2542 104 1e-20 >seq611 Length=183 Score = 109 bits (120), Expect = 3e-22 Identities = 75/81 (93%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 |||| |||||||||||||| || ||||||||| ||||||||||||||||||||||||||| Sbjct 134 AAGTCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGGGTGTACAAAGGGCAG 77 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||| | ||||||||||| Sbjct 76 GGACGTAGT-CAACGCAAGCT 57 >seq2542 Length=176 Score = 104 bits (114), Expect = 1e-20 Identities = 74/81 (91%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 |||| |||||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct 127 AAGTCCTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAG 70 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||| | ||||||||||| Sbjct 69 GGACGTAGT-CAACGCAAGCT 50 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300792820280