Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900101485.1_202016-11-05] 2,546 sequences; 20,775,628 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq2360 95.1 2e-17 >seq2360 Length=233379 Score = 95.1 bits (104), Expect = 2e-17 Identities = 178/258 (69%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 |||||||||||| |||||| ||| || || || || |||||||| | || | || Sbjct 127687 TTCACCGTGGTTACCCTCGTTATTGGCGAGACCAAAAAGACGCTCCTTAAGCATGCGGTC 127746 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCG-CCTTGTCACTGAACCCCG 167 ||||||| || || || | || | ||| | ||| |||||| || || | Sbjct 127747 CTTTCCGTTCCAGAGAGCAAGACTCAAAC-CCATTCTGGCGTGGTTGTCAGAGAGACCGG 127805 Query 168 CCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGG 227 | || || ||||| ||||| ||||| | ||||| || || || || ||||||| | Sbjct 127806 CAAGACCATCCTCACCCCATCGGTAAGTACGGCTACGAGCCAACTCGTGAGGGAAGTGAG 127865 Query 228 CCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCA 287 ||| ||||| || | || |||||| || || || |||||||| || ||||| || | Sbjct 127866 TCCAAGCGTCACCGTTAGCAGAGTAGTCCTCACGAACGGTGCCCCACTGACGTTCACTGA 127925 Query 288 GGTAGGGGCCCCACTCGC 305 | ||||| ||||| |||| Sbjct 127926 GATAGGGACCCCA-TCGC 127942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007974336320