Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20bromivora_20[genbank_20GCA_5F900101485.1_202016-11-05] 2,546 sequences; 20,775,628 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq2416 87.8 6e-15 >seq2416 Length=13067 Score = 87.8 bits (96), Expect = 6e-15 Identities = 123/174 (71%), Gaps = 19/174 (11%) Strand=Plus/Plus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92 |||||||||| |||| |||||| ||||| ||||| | || || Sbjct 2474 TAGACCCGAAGCCAAATGATCTTACCATGACCAGGCTAAA--------AA---------- 2515 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||| |||||| ||||||| |||||| || ||| ||||| ||||||||||||| Sbjct 2516 AGGGCCGAACAGGTGAATGTTGCAAAATTCTCTGAAGAGTTGTGGTAAGGGGTGAAAGGC 2575 Query 153 TAAACAAACTTGGA-AATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCT 205 || | || ||||| ||||||||| ||| ||||| |||||||||||| |||| Sbjct 2576 CAATCTAATTTGGATGATAGCTGGTATTCTGCGAAACCTATTTAGGTAGGGCCT 2629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689556982784