Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20cynodontis_20[genbank_20GCA_5F001676635.1_202016-06-25] 15,584 sequences; 24,384,713 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq205 107 4e-21 >seq205 Length=31044 Score = 107 bits (118), Expect = 4e-21 Identities = 181/258 (70%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 ||||||||||||||||||| |||| || ||||| || |||||||||| || | ||| Sbjct 20609 TTCACCGTGGTTGCCCTCGTTGTTGGCGAGACCGAAAAGACGCTCCTTGAGCATACGATC 20550 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCG-CCTTGTCACTGAACCCCG 167 ||||||| || || || | || | ||| | | ||| |||||| | || | Sbjct 20549 TTTTCCGTTCCAGAGCGCAAGACTCAAAC-CCATCCTGGCGTGGTTGTCAGACAGACCGG 20491 Query 168 CCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGG 227 | || || ||||| ||||| ||||| | |||||||| || || || ||||||| | Sbjct 20490 CAAGACCATCCTCTCCCCATCGGTAAGTACGGCTGCGAGCGGACTCGTGAGGGAAGTGAG 20431 Query 228 CCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCA 287 ||| || || || | ||| ||| || || || || || ||||| || || || || | Sbjct 20430 TCCAAGCATCACCGTTGGCCGAGTAATCCTCTCGAACGGTACCCCACTGACGCTCACTGA 20371 Query 288 GGTAGGGGCCCCACTCGC 305 |||| || ||||| |||| Sbjct 20370 GGTAAGGACCCCA-TCGC 20354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007842913280