Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilago_20cynodontis_20[genbank_20GCA_5F001676635.1_202016-06-25]
15,584 sequences; 24,384,713 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq1173 717 0.0
>seq1173
Length=1163
Score = 717 bits (794), Expect = 0.0
Identities = 467/506 (92%), Gaps = 8/506 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||
Sbjct 518 GTACTCATTCCAATTACAAGACCCAAAAGGGCCCTGCATTGTTATTTATTGTCACTACCT 459
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 458 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 399
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 398 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGTA 339
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||
Sbjct 338 GGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCAGCA 279
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||| ||||||||| ||||||||||||||||||| | | ||| ||| | |||
Sbjct 278 CAAGGCCGTGCGATTCGAGAAGTTATTATGAATCACCA---AACTCCG-AGGAGGATGG- 224
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGG-TTTTTA-GCATGTATTAGCTCT 358
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 223 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGCTTTTTACGCATGTATTAGCTCT 164
Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418
||||||||||| ||||||||||||| ||| || ||||||||||| ||||||||||||||
Sbjct 163 AGAATTACCACAGTTATCCATGTAGCAAGAAAC-ATCAAATAAACTATAACTGATTTAAT 105
Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478
||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||
Sbjct 104 GAGCCATTCGCAGTTTCACAGTATAATTTGCGTATACTTAGACATGCATGGCTTAATCTT 45
Query 479 TGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||
Sbjct 44 TGAGACAAGCATATGACTACTGGCAG 19
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510164619264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |