Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilago_20cynodontis_20[genbank_20GCA_5F001736195.1_202016-09-20]
9,247 sequences; 22,572,307 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq2092 208 3e-51
seq2241 147 9e-33
seq603 109 2e-21
>seq2092
Length=432
Score = 208 bits (230), Expect = 3e-51
Identities = 151/175 (86%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||||| | | ||| | ||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 237 TGTGATACACTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAAT 296
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| ||||| |||||||||||| |||||||||||||| ||||||| |||||| ||||||
Sbjct 297 GCCATCTAAGGCTAAATATTGGGGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 356
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197
||||||| |||||| ||||||||||||| || ||||||||||| |||||||||
Sbjct 357 TGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTGAAATTGCCAAAAGGGAAG 411
>seq2241
Length=409
Score = 147 bits (162), Expect = 9e-33
Identities = 111/130 (85%), Gaps = 2/130 (2%)
Strand=Plus/Plus
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| |||||||||||||||||||||||| ||||||||| |||||||| ||||||
Sbjct 280 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATGCGAGTCTTTGGGTGGCAAACC 339
Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527
| | ||| |||||||||||| |||||||| || | |||||||||||||||||||
Sbjct 340 CATAGGCGCAATGAAAGTGAATTCAGGTGGGATCC--GCAAGGTGCACCATCGACCGATC 397
Query 528 CTGATGTCTT 537
|| | |||||
Sbjct 398 CTCACGTCTT 407
>seq603
Length=7591
Score = 109 bits (120), Expect = 2e-21
Identities = 104/130 (80%), Gaps = 6/130 (5%)
Strand=Plus/Minus
Query 462 CAAACCCGTGCGCG-TAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCG 520
||| ||| | |||| | |||||||| |||||||| || | | ||||||||||||
Sbjct 129 CAAGCCCATACGCGCTCTTGAAAGTGGGTTCAGGTGGGATCC-GCAAAGGTGCACCATCG 71
Query 521 ACCGATCCTGATGTCTTCGGA----TGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGA 576
||||||||| | ||||| | |||||||||||||||||||| ||||||||||||||
Sbjct 70 ACCGATCCTCACGTCTTTTAAGTCGTGGATTTGAGTAAGAGCATACCTGTTGGGACCCGA 11
Query 577 AAGATGGTGA 586
||||||||||
Sbjct 10 AAGATGGTGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079801651850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |