Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20cynodontis_20[genbank_20GCA_5F001736195.1_202016-09-20] 9,247 sequences; 22,572,307 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1300 201 1e-49 >seq1300 Length=916 Score = 201 bits (222), Expect = 1e-49 Identities = 159/188 (85%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG-CTCGAAT 59 |||||||||||| |||||||||||||||||||| |||||||||||||| | | | ||||| Sbjct 907 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 848 Query 60 ACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCG 119 | |||| |||||||||| ||||||||||||||||||||||||||| ||||||||| || | Sbjct 847 ATATTAGCATGGAATAACAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAACTG 788 Query 120 CCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATT 179 |||||||||| || | ||| || |||||| | |||||| | | |||||||||| Sbjct 787 -CCGTAATGATTAAAAGGGACAGCCGGGGGCATTAGTATTTGCACGCTAGAGGTGAAATT 729 Query 180 CTTGGATT 187 |||||||| Sbjct 728 CTTGGATT 721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511954134880