Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20cynodontis_20[genbank_20GCA_5F001736195.1_202016-09-20] 9,247 sequences; 22,572,307 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq215 107 4e-21 >seq215 Length=31057 Score = 107 bits (118), Expect = 4e-21 Identities = 181/258 (70%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 ||||||||||||||||||| |||| || ||||| || |||||||||| || | ||| Sbjct 20610 TTCACCGTGGTTGCCCTCGTTGTTGGCGAGACCGAAAAGACGCTCCTTGAGCATACGATC 20551 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCG-CCTTGTCACTGAACCCCG 167 ||||||| || || || | || | ||| | | ||| |||||| | || | Sbjct 20550 TTTTCCGTTCCAGAGCGCAAGACTCAAAC-CCATCCTGGCGTGGTTGTCAGACAGACCGG 20492 Query 168 CCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGG 227 | || || ||||| ||||| ||||| | |||||||| || || || ||||||| | Sbjct 20491 CAAGACCATCCTCTCCCCATCGGTAAGTACGGCTGCGAGCGGACTCGTGAGGGAAGTGAG 20432 Query 228 CCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCA 287 ||| || || || | ||| ||| || || || || || ||||| || || || || | Sbjct 20431 TCCAAGCATCACCGTTGGCCGAGTAATCCTCTCGAACGGTACCCCACTGACGCTCACTGA 20372 Query 288 GGTAGGGGCCCCACTCGC 305 |||| || ||||| |||| Sbjct 20371 GGTAAGGACCCCA-TCGC 20355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007906790240