Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20cynodontis_20[genbank_20GCA_5F001736195.1_202016-09-20] 9,247 sequences; 22,572,307 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq832 717 0.0 >seq832 Length=2701 Score = 717 bits (794), Expect = 0.0 Identities = 467/506 (92%), Gaps = 8/506 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| Sbjct 145 GTACTCATTCCAATTACAAGACCCAAAAGGGCCCTGCATTGTTATTTATTGTCACTACCT 204 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 205 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 264 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 265 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGTA 324 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| || Sbjct 325 GGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCAGCA 384 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||||||||||||||| | | ||| ||| | ||| Sbjct 385 CAAGGCCGTGCGATTCGAGAAGTTATTATGAATCACCA---AACTCCG-AGGAGGATGG- 439 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGG-TTTTTA-GCATGTATTAGCTCT 358 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct 440 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGCTTTTTACGCATGTATTAGCTCT 499 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 ||||||||||| ||||||||||||| ||| || ||||||||||| |||||||||||||| Sbjct 500 AGAATTACCACAGTTATCCATGTAGCAAGAAAC-ATCAAATAAACTATAACTGATTTAAT 558 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||| Sbjct 559 GAGCCATTCGCAGTTTCACAGTATAATTTGCGTATACTTAGACATGCATGGCTTAATCTT 618 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 619 TGAGACAAGCATATGACTACTGGCAG 644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510260333312