Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1 289 5e-76 >seq1 Length=1882320 Score = 289 bits (320), Expect = 5e-76 Identities = 220/257 (86%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 62 GGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAAT 120 ||| |||||||| ||||||||||||||||||||||||||||||||||| | | | ||||| Sbjct 1105354 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 1105295 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180 | ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct 1105294 ATATTAGCATGGAATAACAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAACTG 1105235 Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 ||||||||||||| ||||| || |||||| | |||||| | ||||||||||||| Sbjct 1105234 CCGTAATGATTAAAAGGGACAGCCGGGGGCATTAGTATTTGCACGCTAGAGGTGAAATTC 1105175 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||||| |||||| ||||||||||||| || ||||| |||||||||||||||| Sbjct 1105174 TTGGATTGTGCAAAGACTTCCTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA 1105115 Query 301 GTGAACGAAAGTTAGGG 317 ||||||| ||||||| Sbjct 1105114 -AGAACGAAGGTTAGGG 1105099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915197272704