Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1 453 2e-125 >seq1 Length=1882320 Score = 453 bits (502), Expect = 2e-125 Identities = 279/296 (94%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCA-TCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| ||||||| || | || ||| |||||||||||||||||||||||||| Sbjct 1100545 TACTAAGTTGAATTACTGTTACGATAACCCTCAATCAGTAGGGTAAAACTAACCTGTCTC 1100604 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1100605 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 1100664 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1100665 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 1100724 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1100725 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 1100784 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1100785 TCAAATGCCGAGGATCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1100840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854397453888