Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq79 73.4 6e-11 >seq79 Length=472637 Score = 73.4 bits (80), Expect = 6e-11 Identities = 99/138 (72%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 60 CGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTC 119 ||| ||||| || || || | | ||| ||||| |||||||||| |||||||||||| || Sbjct 210801 CGGAGCCGGAGCCTCCTCGATGATCTTTTGGTGTCGACGTTGCACCGAGCAATCGCGCTC 210860 Query 120 GCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGG 179 | || | |||| || | ||||| | || |||||||| |||||||| || Sbjct 210861 CGAGATGTACACTGCGTTTCCGAGTTTGTCGGCAAACACCTGCACTTCGACGTGACGAGG 210920 Query 180 GTTGGTCAGGTACTTTTC 197 ||| ||||||||||| Sbjct 210921 AGCGGTGAGGTACTTTTC 210938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735997875260