Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq234 105 2e-20 >seq234 Length=139505 Score = 105 bits (116), Expect = 2e-20 Identities = 148/203 (73%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACC-CAACAAAGTGGGCTCC 253 ||| ||| ||||||||||||||| ||||||||||| |||| | | || | Sbjct 98373 AAACTAACTCGCTGACCCATTATGCAAAAGGTACGTTGTCATTTCTTTCTTTTAAACTTC 98314 Query 254 CACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC-TCTCCGGGGTTCTTTT 312 ||||||| || | ||| |||||| ||||||||||| | ||| | ||||||| Sbjct 98313 AACTGCTTATAGGATTACTAGTTCAGGTTCTATTTCACTAGTCATCTACT---TTCTTTT 98257 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||| |||||| |||| | |||||||| | | || || ||||||||||||| Sbjct 98256 CACCTTTCACTCACGTTACTC-TCCACTATCGCTAGATATGTTATACTTAGCCTTGGAGG 98198 Query 373 ATGGTCCCCCCATATTCAGACAA 395 ||||| ||||| |||||| |||| Sbjct 98197 ATGGTACCCCCTTATTCATACAA 98175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241596300032