Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq146 80.6 5e-13 >seq146 Length=241836 Score = 80.6 bits (88), Expect = 5e-13 Identities = 100/137 (73%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 164 CCCGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAG 223 || || || ||||| || ||||| || || || || ||||| || || || ||||| Sbjct 230889 CCGGCAAGACCGTCTTCACCCCATCGATATGCACGACTGCGCGCGGATTCGTGCGGGAAA 230948 Query 224 TAGGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCG 283 | | ||| || ||||||| |||| || ||||| || ||||||||||| || ||||| Sbjct 230949 TGAGACCATGCATCGCCATTGGCGGAATAATCTTCACGAACCGTGCCCCACTGCCGTTCA 231008 Query 284 CTCAGGTAGGGGCCCCA 300 || || || || ||||| Sbjct 231009 CTGAGATAAGGACCCCA 231025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007996996160