Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20esculenta_20[genbank_20GCA_5F000819925.1_202015-01-16] 298 sequences; 20,196,985 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 2e-18 >seq1 Length=1882320 Score = 98.7 bits (108), Expect = 2e-18 Identities = 91/113 (81%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | || ||| | |||||||| || || | |||| || |||||| Sbjct 1100547 GTACGAGAGGAACTGTTGA-TTC-GTGTAATTGGTCTTGGCCGTTGTCCAACAGGGCAGT 1100490 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || |||||||||||| ||| ||| ||||||||||||||||||| ||||||| Sbjct 1100489 GCGGCGAAGCTACCACACGCTAGATAATGGCTGAACGCCTCTAAGCCAGAATC 1100437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197635072