Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20hordei_20[genbank_20GCA_5F000286035.1_202012-05-30] 713 sequences; 21,150,702 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq582 107 4e-21 >seq582 Length=221380 Score = 107 bits (118), Expect = 4e-21 Identities = 181/258 (70%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 |||||||||||| |||||| |||| || ||||| || |||||||| | || | ||| Sbjct 212317 TTCACCGTGGTTACCCTCGTTGTTGGCGAGACCGAAAAGACGCTCCTTAAGCATGCGATC 212376 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCG-CCTTGTCACTGAACCCCG 167 ||||||| || || || | || | ||| | ||| |||||| || || | Sbjct 212377 CTTTCCGTTCCAGAGAGCAAGACTCAAAC-CCATTCTGGCGTGGTTGTCAGAGAGACCGG 212435 Query 168 CCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGG 227 | || || ||||| ||||| || || | ||||| || || ||||| ||||||| | Sbjct 212436 CAAGACCATCCTCACCCCATCGATAAGTACGGCTACGGGCCAACTCATGAGGGAAGTGAG 212495 Query 228 CCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCA 287 ||| ||||| || | || |||||| || || || |||||||| || ||||| || | Sbjct 212496 TCCAAGCGTCACCGTTAGCAGAGTAGTCCTCACGAACGGTGCCCCACTGACGTTCACTGA 212555 Query 288 GGTAGGGGCCCCACTCGC 305 | ||||| ||||| |||| Sbjct 212556 GATAGGGACCCCA-TCGC 212572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007992812960