Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20hordei_20[genbank_20GCA_5F000286035.1_202012-05-30] 713 sequences; 21,150,702 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq319 315 3e-81 >seq319 Length=680 Score = 315 bits (348), Expect = 3e-81 Identities = 203/221 (92%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 10755 ACAGCTTGCTCAGGGTCAACCAGAATTAACATCCCGTCAGGAAAACTAGGTTTGGAACCT 10814 ||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| ||| Sbjct 680 ACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCTTGGCTTGGAGCCT 621 Query 10815 GTTGGTGCGGTCATTGAGTTACCTTCAACCTCAAGCCAGAATGCAGAGTCACTGGCTTTT 10874 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct 620 GTTGGTGCGGTCATGGAATTACCTTCAACCTCAAGCCAGAATGCAGAATCACTGGCTTTT 561 Query 10875 TTGGTTGTGCTTACCAATCTCTCCGCATCACCTTTGGTAAAGGTTCTGAGTTCTGGAGAG 10934 |||||| |||||||| ||||||||||||||||||||||||||||||| || | || ||| Sbjct 560 TTGGTT-TGCTTACCCATCTCTCCGCATCACCTTTGGTAAAGGTTCTAAGCTTAGGTGAG 502 Query 10935 AACATCCCAGCCTGAACATGAGAAAAAACAGGGTACTCATA 10975 |||||||| |||||||||||||||||||||||||||||||| Sbjct 501 AACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATA 461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175544113677348