Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20maydis_20[genbank_20GCA_5F001662005.1_202016-06-13] 2,938 sequences; 20,208,930 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq2227 111 3e-22 >seq2227 Length=158722 Score = 111 bits (122), Expect = 3e-22 Identities = 178/253 (70%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 ||| || ||||| |||||| |||| || || || ||||||||||||| || | ||| Sbjct 136238 TTCGCCATGGTTTCCCTCGTTGTTGGCGAGACCAAAGAGGCGCTCCTTGAGCATGCGATC 136297 Query 109 GCGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCC-TTGTCACTGAACCCCG 167 ||||||| || |||| || ||| | ||| | | | || || || || | Sbjct 136298 TTTTCCGTTCCAGAGAGCCAAGCTCAGAC-CCATCCTGCAGTGGTTATCCGAGAGACCGG 136356 Query 168 CCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGG 227 | || ||||| || ||||| ||||||| |||||| || || ||||||||||||| | Sbjct 136357 CAAGACCGTCTTCACCCCATCGGTAGGTGCGGCTACGAGCCAATTCATGGGGGAAGTGAG 136416 Query 228 CCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCA 287 ||| || || || | || |||||| || || || |||||||| || || ||||| | Sbjct 136417 ACCATGCATCTCCGTTGGACGAGTAGTCCTCTCGAACAGTGCCCCACTGACGCTCGCTGA 136476 Query 288 GGTAGGGGCCCCA 300 |||| || ||||| Sbjct 136477 GGTAAGGACCCCA 136489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007970384960