Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20maydis_20[genbank_20GCA_5F001736185.1_202016-09-20] 1,978 sequences; 19,929,430 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1462 711 0.0 >seq1462 Length=587 Score = 711 bits (788), Expect = 0.0 Identities = 467/507 (92%), Gaps = 9/507 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| Sbjct 69 GTACTCATTCCAATTACAAGACCCAAAAGGGCCCTGCATTGTTATTTATTGTCACTACCT 128 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 129 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 188 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 189 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGTA 248 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| || Sbjct 249 GGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCAGCA 308 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||||||||||||||| | | ||| ||| | ||| Sbjct 309 CAAGGCCGTGCGATTCGAGAAGTTATTATGAATCACCA---AACTCCG-AGGAGGATGG- 363 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTA-GCATGTATTAGCTC 357 ||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||| Sbjct 364 TTTTTATCTAATAAATACACCCCTTCCAGAAGTCGGGGCTTTTTACGCATGTATTAGCTC 423 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||||||||||| ||||||||||||| ||| || ||||||||||| ||||||||||||| Sbjct 424 TAGAATTACCACAGTTATCCATGTAGCAAGAAAC-ATCAAATAAACTATAACTGATTTAA 482 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477 |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct 483 TGAGCCATTCGCAGTTTCACAGTATAATTTGCGTATACTTAGACATGCATGGCTTAATCT 542 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| Sbjct 543 TTGAGACAAGCATATGACTACTGGCAG 569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510370124288