Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20maydis_20[genbank_20GCA_5F001736215.1_202016-09-20] 2,695 sequences; 20,132,962 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1903 122 5e-26 >seq1903 Length=3301 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 5/120 (4%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57 ||||||||| |||||||||||||||| | ||||| |||| || |||||| ||||| Sbjct 2788 GAACCCAAAAACTTTGATTTCTCGTACCGCGCCGATCGAGCCAGTGAAATGAG--CATCG 2845 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| | |||||||||||||||| ||||||||||| ||||||||| ||||| ||||| Sbjct 2846 ACCGATTCGGAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTCGA 2905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278392966050