Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20maydis_20[genbank_20GCA_5F001736215.1_202016-09-20] 2,695 sequences; 20,132,962 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq1928 73.4 5e-11 >seq1928 Length=2658 Score = 73.4 bits (80), Expect = 5e-11 Identities = 72/92 (78%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 157 AAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATT 216 || ||||||| || |||||||| |||||| || | || | | | |||||||||||| Sbjct 2415 AACTTACGGGCACAATTTGCCGAGTTCCTTCACAAGCATTATCTCTA-CGCCTTAGTATT 2357 Query 217 CTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 |||||||| ||||||||||||||| |||| Sbjct 2356 CTCTACCTACGAACCTGTGTCGGTTTAGGGTA 2325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694381870735