Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20maydis_20[genbank_20GCA_5F001736215.1_202016-09-20] 2,695 sequences; 20,132,962 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2148 711 0.0 >seq2148 Length=615 Score = 711 bits (788), Expect = 0.0 Identities = 467/507 (92%), Gaps = 9/507 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| Sbjct 91 GTACTCATTCCAATTACAAGACCCAAAAGGGCCCTGCATTGTTATTTATTGTCACTACCT 150 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 151 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 210 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 211 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGTA 270 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| || Sbjct 271 GGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCAGCA 330 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||||||||||||||| | | ||| ||| | ||| Sbjct 331 CAAGGCCGTGCGATTCGAGAAGTTATTATGAATCACCA---AACTCCG-AGGAGGATGG- 385 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTA-GCATGTATTAGCTC 357 ||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||| Sbjct 386 TTTTTATCTAATAAATACACCCCTTCCAGAAGTCGGGGCTTTTTACGCATGTATTAGCTC 445 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||||||||||| ||||||||||||| ||| || ||||||||||| ||||||||||||| Sbjct 446 TAGAATTACCACAGTTATCCATGTAGCAAGAAAC-ATCAAATAAACTATAACTGATTTAA 504 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477 |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct 505 TGAGCCATTCGCAGTTTCACAGTATAATTTGCGTATACTTAGACATGCATGGCTTAATCT 564 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| Sbjct 565 TTGAGACAAGCATATGACTACTGGCAG 591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510359294720