Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02]
245 sequences; 20,691,077 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq78 482 1e-133
>seq78
Length=7809
Score = 482 bits (534), Expect = 1e-133
Identities = 532/701 (76%), Gaps = 47/701 (7%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||||| | | ||| | ||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 4436 TGTGATACGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAAT 4495
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| ||||| |||||||||||| |||||||||||||| ||||||| |||||| ||||||
Sbjct 4496 GCCATCTAAGGCTAAATATTGGGGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 4555
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
||||||| |||||| ||||||||||||| || ||||||||||| ||||||||| |
Sbjct 4556 TGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTGAAATTGCCAAAAGGGAAGGGTAG 4615
Query 203 GCAACCAGACTTGC--CCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCG 260
| |||| ||| || | | ||| || | | | |||| | ||| |
Sbjct 4616 GAGGTCAGAGATGCGGCCTAGGAT--TCAGCCTTGCTTTTGCTTGGTGT--TTTTCCTAG 4671
Query 261 GT--CAGGCCAGCATCAGCTC-GGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317
|| ||||||| | || | | |||| | ||| || || |||||||||| || |
Sbjct 4672 GTTGCAGGCCAACGTCGGTTTTGGGCACT-GGAGAAGGGTGGAAGGAATGTGGCACCTCT 4730
Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGC--CCG----CCTGGACTG-AG-GTCCG 369
||||| ||||||||||| | || | || ||| | |||| | || || |
Sbjct 4731 CGGGGTGTGTTATAGCCTTCTACTGGATACAGCGACCGAGACCGAGGACAGCAGCGTACT 4790
Query 370 CGC------------TCCGGC-----------TAGGATGCTGGCGTAATGGTTGTAAGCG 406
||| || ||| |||| | |||| |||||| | |
Sbjct 4791 CGCAAGAGCGGGCCTTCGGGCACCTTTACGCTTAGGGCGTTGGCATAATGGCCCTCTACC 4850
Query 407 GCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAAC 466
||||||||| |||||||||||||||||||||||| ||||||||| |||||||| |||||
Sbjct 4851 ACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATGCGAGTCTTTGGGTGGCAAAC 4910
Query 467 CCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGAT 526
|| | ||| |||||||||||| |||||||| || | ||||||||||||||||||
Sbjct 4911 CCATAGGCGCAATGAAAGTGAATTCAGGTGGGATCCGC--AAGGTGCACCATCGACCGAT 4968
Query 527 CCTGATGTCTTCGGA----TGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582
||| | ||||| | |||||||||||||||||||| ||||||||||||||||||||
Sbjct 4969 CCTCACGTCTTTTAAGTCGTGGATTTGAGTAAGAGCATACCTGTTGGGACCCGAAAGATG 5028
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 5029 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTT 5088
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| |||||||||||||||||||||||||||||||||||||
Sbjct 5089 CTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 5129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079994744750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |