Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02] 245 sequences; 20,691,077 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq78 482 1e-133 >seq78 Length=7809 Score = 482 bits (534), Expect = 1e-133 Identities = 532/701 (76%), Gaps = 47/701 (7%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| | | ||| | ||||||||||||||||||||||||||| ||||||| ||||||| Sbjct 4436 TGTGATACGCTTTCTAAGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTAAAT 4495 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | ||||| |||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 4496 GCCATCTAAGGCTAAATATTGGGGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 4555 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||||||| || ||||||||||| ||||||||| | Sbjct 4556 TGAAAAGAACTTTGAAAAGAGAGTTAAACAGTACGTGAAATTGCCAAAAGGGAAGGGTAG 4615 Query 203 GCAACCAGACTTGC--CCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCG 260 | |||| ||| || | | ||| || | | | |||| | ||| | Sbjct 4616 GAGGTCAGAGATGCGGCCTAGGAT--TCAGCCTTGCTTTTGCTTGGTGT--TTTTCCTAG 4671 Query 261 GT--CAGGCCAGCATCAGCTC-GGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 || ||||||| | || | | |||| | ||| || || |||||||||| || | Sbjct 4672 GTTGCAGGCCAACGTCGGTTTTGGGCACT-GGAGAAGGGTGGAAGGAATGTGGCACCTCT 4730 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGC--CCG----CCTGGACTG-AG-GTCCG 369 ||||| ||||||||||| | || | || ||| | |||| | || || | Sbjct 4731 CGGGGTGTGTTATAGCCTTCTACTGGATACAGCGACCGAGACCGAGGACAGCAGCGTACT 4790 Query 370 CGC------------TCCGGC-----------TAGGATGCTGGCGTAATGGTTGTAAGCG 406 ||| || ||| |||| | |||| |||||| | | Sbjct 4791 CGCAAGAGCGGGCCTTCGGGCACCTTTACGCTTAGGGCGTTGGCATAATGGCCCTCTACC 4850 Query 407 GCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAAC 466 ||||||||| |||||||||||||||||||||||| ||||||||| |||||||| ||||| Sbjct 4851 ACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATGCGAGTCTTTGGGTGGCAAAC 4910 Query 467 CCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGAT 526 || | ||| |||||||||||| |||||||| || | |||||||||||||||||| Sbjct 4911 CCATAGGCGCAATGAAAGTGAATTCAGGTGGGATCCGC--AAGGTGCACCATCGACCGAT 4968 Query 527 CCTGATGTCTTCGGA----TGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATG 582 ||| | ||||| | |||||||||||||||||||| |||||||||||||||||||| Sbjct 4969 CCTCACGTCTTTTAAGTCGTGGATTTGAGTAAGAGCATACCTGTTGGGACCCGAAAGATG 5028 Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 5029 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGCGGTT 5088 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||||||||||||||||||||||||||||||| Sbjct 5089 CTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 5129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079994744750