Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02] 245 sequences; 20,691,077 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq214 78.8 2e-12 >seq214 Length=43604 Score = 78.8 bits (86), Expect = 2e-12 Identities = 120/171 (70%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 167 ACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226 |||||| | | ||||| ||||||| | | | | || ||| || | | ||||| | Sbjct 3743 ACTAGAATCTAATAGAGGATAGTGGAATGCTAGGAGGAGGGATGATATCCATTGATATCT 3684 Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAG 286 | ||||||| || |||||| ||||| | | || | ||||||||| | | ||||| Sbjct 3683 AGCGGAACACTAAAGGCGAAAGCAGCTATCCAGCTAAAGATTGACGCTCAGGGATGAAAG 3624 Query 287 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||| ||||||||||| |||||||| || ||||| || Sbjct 3623 TCTGGGGAGCAAAACAGATTAGATACCTGTGTAGTCCAGACCGTAAACTAT 3573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289596840480