Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02]
245 sequences; 20,691,077 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq214 78.8 2e-12
>seq214
Length=43604
Score = 78.8 bits (86), Expect = 2e-12
Identities = 120/171 (70%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 167 ACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226
|||||| | | ||||| ||||||| | | | | || ||| || | | ||||| |
Sbjct 3743 ACTAGAATCTAATAGAGGATAGTGGAATGCTAGGAGGAGGGATGATATCCATTGATATCT 3684
Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAG 286
| ||||||| || |||||| ||||| | | || | ||||||||| | | |||||
Sbjct 3683 AGCGGAACACTAAAGGCGAAAGCAGCTATCCAGCTAAAGATTGACGCTCAGGGATGAAAG 3624
Query 287 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337
||||||||||| ||||||||||| |||||||| || ||||| ||
Sbjct 3623 TCTGGGGAGCAAAACAGATTAGATACCTGTGTAGTCCAGACCGTAAACTAT 3573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289596840480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |