Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02] 245 sequences; 20,691,077 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq214 96.9 9e-18 >seq214 Length=43604 Score = 96.9 bits (106), Expect = 9e-18 Identities = 115/155 (74%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || |||||| ||| || | ||||||||||||||| | ||||||||||| ||| Sbjct 18505 TAAACCGCATCTGCACGGCTAATTCAATTTCACTGAGATGCTTGTGGAGACAGCAGGGCC 18446 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 | |||||| ||||| |||||| | | ||| | |||||||||||||||| || || Sbjct 18445 A-CGTTACCTCATTCATGCAGGACCACATTTAATGGCCAAGGAATTTCGCTACTTTCAGA 18387 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTC 161 | |||| |||| | ||||| || ||| ||| || Sbjct 18386 TCCTTATAGTTAAGACCGCCATTCACCATGGCATC 18352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260796911040