Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02] 245 sequences; 20,691,077 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq214 113 1e-22 >seq214 Length=43604 Score = 113 bits (124), Expect = 1e-22 Identities = 151/207 (73%), Gaps = 15/207 (7%) Strand=Plus/Minus Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACC-----CAACAAAGTGGG 249 ||| ||| ||||||||||||||| ||||||||||| |||| | | ||| Sbjct 17081 AAACTAACTCGCTGACCCATTATGCAAAAGGTACGTTGTCATTTTTTACTAAAAA----- 17027 Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC-TCTCCGGGGTTC 308 |||| ||||||| || | ||| |||||| ||||||||||| | ||| | | | Sbjct 17026 CTCCAACTGCTTATAGGATTACTAGTTCAGGTTCTATTTCACTAGTCATCTACT---TAC 16970 Query 309 TTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG 368 ||||| |||||| |||||| |||| | |||||||| | | || || ||||||||| Sbjct 16969 TTTTCACCTTTCACTCACGTTACTC-TCCACTATCGCTAGATATGTTATACTTAGCCTTG 16911 Query 369 GAGGATGGTCCCCCCATATTCAGACAA 395 ||||||||| ||||| |||||| |||| Sbjct 16910 GAGGATGGTACCCCCTTATTCATACAA 16884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241596958080