Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02]
245 sequences; 20,691,077 total letters
Query= AAMG01002120.1
Length=347
Score E
Sequences producing significant alignments: (Bits) Value
seq177 114 3e-23
>seq177
Length=158834
Score = 114 bits (126), Expect = 3e-23
Identities = 182/257 (71%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 50 TCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATCG 109
|||||||||||||||||| |||| || ||||| ||||||||||||| || | |||
Sbjct 42918 TCACCGTGGTTGCCCTCGTTGTTGGCAAGACCGAAAAGGCGCTCCTTGAGCATGCGATCC 42977
Query 110 CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCG-CCTTGTCACTGAACCCCGC 168
||||||| || || || | || || ||| | | | |||||| || || ||
Sbjct 42978 TTGCCGTTCCAGAGAGCAAGACTCAAGC-CCATCCTGCAGTGGTTGTCAGACAAACCGGC 43036
Query 169 CAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGC 228
|| || ||||| ||||| ||||||| ||||| || || || || ||||||| |
Sbjct 43037 GAGACCATCCTCACCCCATCGGTAGGTACGGCTACGAGCGGACTCGTGAGGGAAGTGAGA 43096
Query 229 CCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAG 288
||| || || |||| ||| |||||| || || || || ||||| || || || ||
Sbjct 43097 CCAAGCATCTCCATTGGCCGAGTAGTCCTCTCGAACGGTACCCCACTGTCGCTCAGAGAG 43156
Query 289 GTAGGGGCCCCACTCGC 305
||| |||||||| ||||
Sbjct 43157 GTAAGGGCCCCA-TCGC 43172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1007997530400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |