Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02]
245 sequences; 20,691,077 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq78 313 5e-83
>seq78
Length=7809
Score = 313 bits (346), Expect = 5e-83
Identities = 260/315 (83%), Gaps = 6/315 (2%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC-TTTGGCGGGTCGC---CGGCTTC 75
|| ||||||||| ||||||||||||| | || | ||| | || | | || ||||
Sbjct 3040 GAACGAGACCTTGACCTGCTAAATAGACGGGTTGACATTTTGTTGGCCCCTTACGTCTTC 3099
Query 76 TTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATG 133
|||||||||| |||| | || || |||||| | ||||||||||||||||||||||
Sbjct 3100 TTAGAGGGACAATCGACCGTCTAGGTGATGGAGGCAAAAGGCAATAACAGGTCTGTGATG 3159
Query 134 CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCT 193
||||||||||||| |||| ||||||||||||||||||||||| |||||||| | |||
Sbjct 3160 CCCTTAGATGTTCCGGGCTGCACGCGCGCTACACTGACAGAGACAACGAGTGGGGCCCCT 3219
Query 194 TGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAA 253
|| ||| || | |||||||| ||||| ||||| ||||||||||||||| |||| ||| ||
Sbjct 3220 TGTCCGAAATGACTGGGTAAACTTGTGAAACTTTGTCGTGCTGGGGATGGAGCTTTGTAA 3279
Query 254 TTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACG 313
|| ||||||||||||||||||| |||||||||||| ||||||||| ||||||| ||||
Sbjct 3280 TTTTTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGACTACG 3339
Query 314 TCCCTGCCCTTTGTA 328
|||||||||||||||
Sbjct 3340 TCCCTGCCCTTTGTA 3354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947197679360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |