Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02]
245 sequences; 20,691,077 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq214 93.3 1e-16
>seq214
Length=43604
Score = 93.3 bits (102), Expect = 1e-16
Identities = 124/174 (71%), Gaps = 19/174 (11%)
Strand=Plus/Plus
Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92
|||||||||| |||| |||||| ||||| ||||| | || ||
Sbjct 17149 TAGACCCGAAGCCAAATGATCTTACCATGACCAGGCTAAA--------AA---------- 17190
Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152
||| |||||| ||||||| |||||| |||||| ||||| |||||||||||||
Sbjct 17191 AGGGCCGAACAGGTGAATGTTGCAAAATTCTCTGATGAGTTGTGGTAAGGGGTGAAAGGC 17250
Query 153 TAAACAAACTTGGA-AATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCT 205
|| | || ||||| ||||||||| ||| ||||| |||||||||||| ||||
Sbjct 17251 CAATCTAATTTGGATGATAGCTGGTATTCTGCGAAACCTATTTAGGTAGGGCCT 17304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689595860480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |