Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02] 245 sequences; 20,691,077 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq214 93.3 1e-16 >seq214 Length=43604 Score = 93.3 bits (102), Expect = 1e-16 Identities = 124/174 (71%), Gaps = 19/174 (11%) Strand=Plus/Plus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92 |||||||||| |||| |||||| ||||| ||||| | || || Sbjct 17149 TAGACCCGAAGCCAAATGATCTTACCATGACCAGGCTAAA--------AA---------- 17190 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||| |||||| ||||||| |||||| |||||| ||||| ||||||||||||| Sbjct 17191 AGGGCCGAACAGGTGAATGTTGCAAAATTCTCTGATGAGTTGTGGTAAGGGGTGAAAGGC 17250 Query 153 TAAACAAACTTGGA-AATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCT 205 || | || ||||| ||||||||| ||| ||||| |||||||||||| |||| Sbjct 17251 CAATCTAATTTGGATGATAGCTGGTATTCTGCGAAACCTATTTAGGTAGGGCCT 17304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689595860480