Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20trichophora_20[genbank_20GCA_5F001654535.1_202016-06-02] 245 sequences; 20,691,077 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq175 93.3 2e-13 >seq175 Length=282811 Score = 93.3 bits (102), Expect = 2e-13 Identities = 109/145 (75%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 364423 ACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCC 364482 ||| || ||||| || || ||||||| | | |||||||||||||| || ||| || || Sbjct 178463 ACCGATGGTCATTCGTGACGGAATGGCGTGTGGGTTGATGATGATATCGGGCGTCACACC 178404 Query 364483 GTCAGCGGTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCG 364541 || || | || ||||| ||||| || || ||| ||| ||||||||| ||||| || Sbjct 178403 CTCCGCAGAGAATGGCATGTCTTCTTGACGGTACG-TGATACCAATGGTACCCTTCTGAC 178345 Query 364542 CATAGCGAGAAGCAAACTTGTCGCC 364566 | | ||||| ||||||||||| || Sbjct 178344 CGTGACGAGAGGCAAACTTGTCTCC 178320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884880483223785