Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq673 217 2e-54 seq389 73.4 6e-11 >seq673 Length=373 Score = 217 bits (240), Expect = 2e-54 Identities = 174/206 (84%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||| | Sbjct 204 GTACAAAGGGCAGGGACGTAGTCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 147 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||| ||| | || ||||||| ||||| || ||||| ||| || Sbjct 146 CTCGTTGAAGAGCAAAAATTACAAAGCTCCATCCCCAGCACGACAAAGTTTCACAAGTTT 87 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | | | |||| ||||| | | |||||||| | |||||||||||||||||| Sbjct 86 ACCCAGTCATTTCGGACAAGGGGCTCCACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCA 27 Query 180 GCCCAGAACATCTAAGGGCATCACAG 205 |||| ||||||||||||||||||||| Sbjct 26 GCCCGGAACATCTAAGGGCATCACAG 1 >seq389 Length=510 Score = 73.4 bits (80), Expect = 6e-11 Identities = 43/45 (96%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 205 |||||||||||||||||| |||| ||||||||||||||||||||| Sbjct 500 TCAGTGTAGCGCGCGTGCAGCCCGGAACATCTAAGGGCATCACAG 456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751956785380