Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq403 104 6e-20 >seq403 Length=497 Score = 104 bits (114), Expect = 6e-20 Identities = 200/291 (69%), Gaps = 18/291 (6%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || |||||| ||| || | ||||||||||||||| | ||||||||||| ||| Sbjct 41 TAAACCGCATCTGCACGGCTAATTCAATTTCACTGAGATGCTTGTGGAGACAGCAGGGCC 100 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 | |||||| ||||| |||||| | | ||| | |||||||||||||||| || || Sbjct 101 A-CGTTACCTCATTCATGCAGGACCACATTTAATGGCCAAGGAATTTCGCTACTTTCAGA 159 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAA- 185 | |||| |||| | ||||| || ||| ||| || | || | || ||||| ||| Sbjct 160 TCCTTATAGTTAAGACCGCCATTCACCATGGCATC-AGTTAGTGACTCTAGTTAG-TAAG 217 Query 186 --CCCCATCAATTAACCTTC-----------CGGCACCGGGCAGGCGTCACACCCTATAC 232 | || | | |||||| |||| |||||| ||||| | ||||| Sbjct 218 ATACTAATTAGATCACCTTCTTTACACGACATGGCATTGGGCAGAGTTCACAACTTATAC 277 Query 233 GTCCACT-TTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGC 282 ||| ||||| || ||| |||||||||||| |||||||||||||| Sbjct 278 AAGTACTATTCGTCTTAGCAAGTTGCTGTGTTTTTGGTAAACAGTCGCAGC 328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260725209344