Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20]
5,932 sequences; 19,606,533 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq403 104 6e-20
>seq403
Length=497
Score = 104 bits (114), Expect = 6e-20
Identities = 200/291 (69%), Gaps = 18/291 (6%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| || |||||| ||| || | ||||||||||||||| | ||||||||||| |||
Sbjct 41 TAAACCGCATCTGCACGGCTAATTCAATTTCACTGAGATGCTTGTGGAGACAGCAGGGCC 100
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
| |||||| ||||| |||||| | | ||| | |||||||||||||||| || ||
Sbjct 101 A-CGTTACCTCATTCATGCAGGACCACATTTAATGGCCAAGGAATTTCGCTACTTTCAGA 159
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAA- 185
| |||| |||| | ||||| || ||| ||| || | || | || ||||| |||
Sbjct 160 TCCTTATAGTTAAGACCGCCATTCACCATGGCATC-AGTTAGTGACTCTAGTTAG-TAAG 217
Query 186 --CCCCATCAATTAACCTTC-----------CGGCACCGGGCAGGCGTCACACCCTATAC 232
| || | | |||||| |||| |||||| ||||| | |||||
Sbjct 218 ATACTAATTAGATCACCTTCTTTACACGACATGGCATTGGGCAGAGTTCACAACTTATAC 277
Query 233 GTCCACT-TTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGC 282
||| ||||| || ||| |||||||||||| ||||||||||||||
Sbjct 278 AAGTACTATTCGTCTTAGCAAGTTGCTGTGTTTTTGGTAAACAGTCGCAGC 328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260725209344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |