Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20]
5,932 sequences; 19,606,533 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq2058 208 1e-51
seq673 84.2 3e-14
seq389 78.8 1e-12
>seq2058
Length=269
Score = 208 bits (230), Expect = 1e-51
Identities = 170/203 (84%), Gaps = 5/203 (2%)
Strand=Plus/Minus
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC-CAATAGTCCCTCTAAGAAGCCA- 118
|||||||||||||| | ||||| || || | | || |||||||||||||| ||
Sbjct 269 ACCTGTTATTGCCTTTTGCCTCCATCACCTAGACGGTCGATTGTCCCTCTAAGAAGACAT 210
Query 119 --GCCACCAACCATA-GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGG 175
| ||||| | | ||| | | ||||||||||||| ||||||||||||||||||||
Sbjct 209 AAGGGGCCAACAAAATGTCAACCCGTCTATTTAGCAGGTCAAGGTCTCGTTCGTTATCGG 150
Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 90
Query 236 CAAGAAAGAGCTATCAATCTGTC 258
|| ||||| || |||||||||||
Sbjct 89 CATGAAAGCGCCATCAATCTGTC 67
>seq673
Length=373
Score = 84.2 bits (92), Expect = 3e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
||||| || ||| ||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 59 ACTCGTTGTCTCTGTCAGTGTAGCGCGCGTGCAGCCCGGAACATCTAAGGGCATCACAG 1
>seq389
Length=510
Score = 78.8 bits (86), Expect = 1e-12
Identities = 49/53 (92%), Gaps = 0/53 (0%)
Strand=Plus/Minus
Query 8 TGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|| ||| ||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 508 TGTCTCTGTCAGTGTAGCGCGCGTGCAGCCCGGAACATCTAAGGGCATCACAG 456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796754210892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |