Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq456 116 9e-24 >seq456 Length=454 Score = 116 bits (128), Expect = 9e-24 Identities = 152/207 (73%), Gaps = 15/207 (7%) Strand=Plus/Plus Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACC-----CAACAAAGTGGG 249 ||| ||| ||||||||||||||| ||||||||||| |||| | | ||| Sbjct 234 AAACTAACTCGCTGACCCATTATGCAAAAGGTACGTTGTCATTTTTTACTAAAAA----- 288 Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCC-TCTCCGGGGTTC 308 |||| ||||||| || | ||| |||||| ||||||||||| | ||| | | | Sbjct 289 CTCCAACTGCTTATAGGATTACTAGTTCAGGTTCTATTTCACTAGTCATCTACT---TAC 345 Query 309 TTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG 368 ||||| |||||| |||||| |||| |||||||||| | | || || ||||||||| Sbjct 346 TTTTCACCTTTCACTCACGTTACTC-TTCACTATCGCTAGATATGTTATACTTAGCCTTG 404 Query 369 GAGGATGGTCCCCCCATATTCAGACAA 395 ||||||||| ||||| |||||| |||| Sbjct 405 GAGGATGGTACCCCCTTATTCATACAA 431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241526348288