Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ustilago_20vetiveriae_20[genbank_20GCA_5F001735935.1_202016-09-20] 5,932 sequences; 19,606,533 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq217 711 0.0 >seq217 Length=1423 Score = 711 bits (788), Expect = 0.0 Identities = 467/507 (92%), Gaps = 9/507 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| Sbjct 530 GTACTCATTCCAATTACAAGACCCAAAAGGGCCCTGCATTGTTATTTATTGTCACTACCT 471 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 470 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 411 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 410 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGTA 351 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| || Sbjct 350 GGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCAGCA 291 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||||||||||||||| | | ||| ||| | ||| Sbjct 290 CAAGGCCGTGCGATTCGAGAAGTTATTATGAATCACCA---AACTCCG-AGGAGGATGG- 236 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTA-GCATGTATTAGCTC 357 ||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||| Sbjct 235 TTTTTATCTAATAAATACACCCCTTCCAGAAGTCGGGGCTTTTTACGCATGTATTAGCTC 176 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||||||||||| ||||||||||||| ||| || ||||||||||| ||||||||||||| Sbjct 175 TAGAATTACCACAGTTATCCATGTAGCAAGAAAC-ATCAAATAAACTATAACTGATTTAA 117 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477 |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct 116 TGAGCCATTCGCAGTTTCACAGTATAATTTGCGTATACTTAGACATGCATGGCTTAATCT 57 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| Sbjct 56 TTGAGACAAGCATATGACTACTGGCAG 30 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510310403072